Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0044 ATGTCATCTGTTGGTGTCAAAACTCTTAGTCCTGTTCCAACTCAACCATTCCATACACAATCATGCTTGTCTTTGGAAGACAAATTCATTTCCATATATCTCTCATATTCGGGGTCATTAACTTTGATGCGTGTTATGGAATGTGACACAATCGAGTCTGTGAAGTTCAAAATCCAAAGGTGTGAGAGCCTTCCTTTCTTAACAAACAACCAGAAGTTGGTTTATGCTGGCCGGGAACTAGCACGGAGTAGTTCGCTGCTCAAGGATTATGGTGTTACAGATGGGAATGTTTTGCATTTGATAATCAAACTTTCAGATCTTCAGGTCATCAATGTGAAAACTTCTTGTGGGAAGGAATTCACATTTCAGGTGGAACGAGGAAGGGATGTCGGGTACATAAAGAAACGGATTGCGAAAAGGGGGGAAGATTTTGCTGATGCTGAAGAGCAGGAAATTGTGTGTAAAGGTGAAAGGCTTGAGGATCAAAGGCTTATTGATGATATCTGCAGCAAACACAGTGATGCAGTTGTGCACCTTTTTGTTAGAAAAAGGCATGTAAAAGTTCAGAGAAGACCGCTTGAGTTGTCCATTTTAGCAACAGAGTCGGGTGATGCGGAAAAAATTGATGTTGTTAAAGAAGGTGCTGTAAGGAAGTATGACACCATTCAGCAAGTTGTGTTGAGAAAGCCTCCTGATAGAGATTTTATTTTGGAGCCAGTTATTGTTAACCCTAAAATCAGATTAGCATCAGAGATTTGGGACATGATAAACTCAACATATGACGGACTAGATAGAGGAAACTACCCAATCCGATCAGTGGAGGGTACAGGGGGAGCTTACTTTATGCTTGATTCGATGGGGCAGAAGTATGTGTCTGTTTTTAAACCCATTGATGAAGAGCCTATGGCTGTGAATAACCCCCGGGGTTTGCCTTTGTCATTAGATGGTGAAGGTTTGAAGAAGGGTACAATAGTCGGTCAAGGAGCACTCAGGGAAGTTGCGGCATATATTTTGGACCATCCGATTAGTGGTCGCCGCTCATTACTTGGTGACGGGAATGGCTTTGCTGGTGTTCCACCGACATTTATGGTTAAGTGCTTGCACAAAGGATTTTACCATCCAGGAGATTTGACTGCTAAGATCGGCTCGATGCAAATGTTTGTGGAGAATAGTGGAAGCTGTGAAGATATGGGCCCTGGGGCTTTTCCGGTGAAGGAAGTACATAAGATTTCTGTATTGGACATGCGACTCGCAAATGCAGATAGGCATGCTGGGAATATTTTGCTCGGCATGGTGGAGGAGAACGAACAGGCTGTTCTGATTCCAATTGATCATGGATACTGCTTGCCTACAAGCTTTGAAGATTGTACCTTCGAATGGCTTTATTGGCCACAAGCTCGCAAGCCATACTCCGCAGAAACCGTGAAGTACATAAACTCATTGGATGCTGAAGAAGATATCGCGCTTTTGAAGTTTCATGGATGGGATCTGCCCGTTGAATGTTCCCGCATCCTTCGAATCTCAACCGTGCTTTTGAAGAAAGGCACAGCGAGGGGATTGACCCCTTTCACCATCGGCAATATCATGTGCAGGGAATCCTTGAATAAGGAATCTGTGATTGAGGAAATAGTACAAGCAGCAATTGATTCTGTTCTTCCCGGCACAAGTGAAGCTACATTTCTGGAATCTGTTTCCGAAATCATGGACCAGCGCCTAGATGAGATCGCAAGCATTTCCCTTTTATAA 1746 0.4353 MSSVGVKTLSPVPTQPFHTQSCLSLEDKFISIYLSYSGSLTLMRVMECDTIESVKFKIQRCESLPFLTNNQKLVYAGRELARSSSLLKDYGVTDGNVLHLIIKLSDLQVINVKTSCGKEFTFQVERGRDVGYIKKRIAKRGEDFADAEEQEIVCKGERLEDQRLIDDICSKHSDAVVHLFVRKRHVKVQRRPLELSILATESGDAEKIDVVKEGAVRKYDTIQQVVLRKPPDRDFILEPVIVNPKIRLASEIWDMINSTYDGLDRGNYPIRSVEGTGGAYFMLDSMGQKYVSVFKPIDEEPMAVNNPRGLPLSLDGEGLKKGTIVGQGALREVAAYILDHPISGRRSLLGDGNGFAGVPPTFMVKCLHKGFYHPGDLTAKIGSMQMFVENSGSCEDMGPGAFPVKEVHKISVLDMRLANADRHAGNILLGMVEENEQAVLIPIDHGYCLPTSFEDCTFEWLYWPQARKPYSAETVKYINSLDAEEDIALLKFHGWDLPVECSRILRISTVLLKKGTARGLTPFTIGNIMCRESLNKESVIEEIVQAAIDSVLPGTSEATFLESVSEIMDQRLDEIASISLL 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0044 581 SMART ubq_7 108 182 IPR000626 GO:0005515
Lal5g0044 581 SMART ubq_7 30 103 IPR000626 GO:0005515
Lal5g0044 581 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 266 559 IPR000403 -
Lal5g0044 581 Gene3D - 24 107 - -
Lal5g0044 581 ProSiteProfiles Ubiquitin domain profile. 110 167 IPR000626 GO:0005515
Lal5g0044 581 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 577 IPR044571 -
Lal5g0044 581 SUPERFAMILY Protein kinase-like (PK-like) 410 576 IPR011009 -
Lal5g0044 581 Pfam Phosphatidylinositol 3- and 4-kinase 275 525 IPR000403 -
Lal5g0044 581 CDD Ubl_ubiquitin_like 110 180 - -
Lal5g0044 581 Gene3D - 108 190 - -
Lal5g0044 581 SUPERFAMILY Ubiquitin-like 102 184 IPR029071 -
Lal5g0044 581 ProSiteProfiles Ubiquitin domain profile. 30 103 IPR000626 GO:0005515
Lal5g0044 581 SUPERFAMILY Ubiquitin-like 36 107 IPR029071 -
Lal5g0044 581 Pfam Ubiquitin family 110 184 IPR000626 GO:0005515
Lal5g0044 581 Pfam Ubiquitin family 39 104 IPR000626 GO:0005515
Lal5g0044 581 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0044 Lal-Chr5 509648 513948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal5g0044 27 576 Acyl Lipid Metabolism Gene Families AT5G24240 55.296 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0044 - - gmx:100791631 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0044 5 509648 513948 Lal17g0563 17 4010701 4014851 ECH
Lal5g0044 5 509648 513948 Lal5g0044 5 509648 513948 ECH
Lal5g0044 5 509648 513948 Lal18g1036 18 13348093 13352155 ECH
Lal16g0071 16 430092 433000 Lal5g0044 5 509648 513948 ECH
Lal15g1455 15 16768484 16771804 Lal5g0044 5 509648 513948 ECH
Lal16g1146 16 7819956 7827176 Lal5g0044 5 509648 513948 ECH
Lal23g1558 23 15637302 15642355 Lal5g0044 5 509648 513948 ECH
Lal5g0044 5 509648 513948 Lal3g1551 3 21271066 21274425 LSH
Lal5g0044 5 509648 513948 Lal18g0289 18 2366084 2369088 LSH
Lal5g0044 5 509648 513948 Lal6g0637 6 4151671 4154787 PCT
Lal5g0044 5 509648 513948 Lal22g0577 22 3948468 3951339 PCT
Lal5g0044 5 509648 513948 Lal18g0289 18 2366084 2369088 PCT
Lal6g0637 6 4151671 4154787 Lal5g0044 5 509648 513948 PCT
Lal22g0577 22 3948468 3951339 Lal5g0044 5 509648 513948 PCT
Lal18g0289 18 2366084 2369088 Lal5g0044 5 509648 513948 PCT