Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal3g1551 ATGTTATCTGCTGGTGTCAAAACTCTTAGTCCTGTTCCAACTGAACCATTCCATACACCATCATGGCTATCATGCTTGTCTTTGGAACACAAATTCATTTCCATATATCTCTCCTTTTCGGGGTCATTGACCCCGATTCGAGTTATGGAATGTGACACCATTGAGTCTGTGAAATTCAAAATCCAAAGGTATGAGAGCCTGCCTTTCTTAACAAATAAGCAAAAGTTGGTTTATGCTGGCCGCGAACTAGCCCGAAGTGATTCGCTGCTCAAGGATTACGGGATAAAGAATGGAAATGTCTTGCATTTGGTCATCAAACTTTCAGATCTTCAGGTCATCAATGTGAAAACTTCATGTGGGAAGGAATTCAAATTTCAAGTGGAACGAGGTAGGGATGTTGGGTACATAAAAAAACAGATTGCGAAACGGGGGAAAGATTTTGCTGATACCGAAGAGCAGGAACTTGTGTGTAAAGGTGAAAGGCTTGAGGACCAAAGGCTTATTGATGATATCTGCAGCAAACACAATGATGCAGTGGTGCATCTTTTTGTTAGAAAAAGGCTTGTAAAAGTTCGGAGAAGACCGCTGGAGTTGTCCATTGTAGCAACAGAGTTGAATGATGAGAAAAAAATTGATGTTGGTAAAGAAGGTACTGTAAGGAAGTATGACGCTGTTAAAAAAGTTGTGCCGAGAAAGCCTCCTGATAGGGGTTACGTTTTGGAGCCGGTAATTGTTAACCCTAAAATCCAAGTAGCTTCATCAATTCGGGATATGATAAACTCTACATATGATGGAGTGGATAGAGGAAACTATCCGATCCAATCAGTGGAGGGAACAGGTGGAGCATACTTTATGCTTGATTCAACAGGGCAGAAGTATGTGTCTGTTTTTAAGCCTATTGATGAAGAGCCGATGGCTGTGAATAACCCTCGGGGTTTGCCTTTGTCATTAGATGGTGAAGGCTTAAAAAAGGGTACTATAGTTGGTCAAGGAGCATTGAGAGAAGTTGCAGCTTATATTTTGGACCATCCGATGAGTGGCCGCCGTGCACTATTTGGTGATGGGAAGGGCTTTGCTGGCGTTCCACCAACACTTATGGTTAAGTGCTTGCATAAAGGATTTAACCATCCGGGAGATTTGACTGCTAAGATTGGATCTATGCAAATGTTTGTGCAAAATAATGGAAGCTGTGAAGATATGGGCCCCGGTGCTTTTATGGTTAAGGAAGTGCATAAAATTTCTGTATTGGACATACGTCTTGCAAATGCAGATAGGCATGCTGGGAATATTTTGCTCGGCGCGGAGGAGGGCAATGATCACGCTGTTCTGATTCCAATTGATCATGGATACTGCTTGCCGACAAGTTTTGAAGATTGTACCTTTGAATGGCTTTACTGGCCACAGGCTCGACAGCCATACTCTGCAAAGACCATTGAGTACATAAACTCATTGGACGCCGAAGAAGATATTGTGCTTTTGAAGTTTCATGGGTGGGATCTGCCAGTTGAATGCGCCCGGACCCTTCGAATATCAACCATGCTGTTGAAGAAAGGCGCAGCGAGAGTAATGACCCCTTTCGCCATCGGAAGCATCATGTGCAGGGAATCCTTGAATAAGGAATCTTTGATTGAGGAAATAGTTCAAGCAGCAACAGATTCTGTTCTTCCTGGCACAAGTGAAGCTACATTTATGGATTCTGTTTCCGAAATCATGGATCGACGCCTCGATGAAATTGCATGCAGCTCCCTTTTATAA 1755 0.4296 MLSAGVKTLSPVPTEPFHTPSWLSCLSLEHKFISIYLSFSGSLTPIRVMECDTIESVKFKIQRYESLPFLTNKQKLVYAGRELARSDSLLKDYGIKNGNVLHLVIKLSDLQVINVKTSCGKEFKFQVERGRDVGYIKKQIAKRGKDFADTEEQELVCKGERLEDQRLIDDICSKHNDAVVHLFVRKRLVKVRRRPLELSIVATELNDEKKIDVGKEGTVRKYDAVKKVVPRKPPDRGYVLEPVIVNPKIQVASSIRDMINSTYDGVDRGNYPIQSVEGTGGAYFMLDSTGQKYVSVFKPIDEEPMAVNNPRGLPLSLDGEGLKKGTIVGQGALREVAAYILDHPMSGRRALFGDGKGFAGVPPTLMVKCLHKGFNHPGDLTAKIGSMQMFVQNNGSCEDMGPGAFMVKEVHKISVLDIRLANADRHAGNILLGAEEGNDHAVLIPIDHGYCLPTSFEDCTFEWLYWPQARQPYSAKTIEYINSLDAEEDIVLLKFHGWDLPVECARTLRISTMLLKKGAARVMTPFAIGSIMCRESLNKESLIEEIVQAATDSVLPGTSEATFMDSVSEIMDRRLDEIACSSLL 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal3g1551 584 Pfam Phosphatidylinositol 3- and 4-kinase 278 526 IPR000403 -
Lal3g1551 584 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 581 - -
Lal3g1551 584 SUPERFAMILY Ubiquitin-like 106 187 IPR029071 -
Lal3g1551 584 Pfam Ubiquitin family 113 187 IPR000626 GO:0005515
Lal3g1551 584 Pfam Ubiquitin family 38 107 IPR000626 GO:0005515
Lal3g1551 584 Gene3D - 110 189 - -
Lal3g1551 584 CDD Ubl_ubiquitin_like 113 183 - -
Lal3g1551 584 SMART ubq_7 111 185 IPR000626 GO:0005515
Lal3g1551 584 SMART ubq_7 33 106 IPR000626 GO:0005515
Lal3g1551 584 SUPERFAMILY Ubiquitin-like 17 107 IPR029071 -
Lal3g1551 584 Gene3D - 27 109 - -
Lal3g1551 584 SUPERFAMILY Protein kinase-like (PK-like) 387 578 IPR011009 -
Lal3g1551 584 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 269 562 IPR000403 -
Lal3g1551 584 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 581 IPR044571 -
Lal3g1551 584 ProSiteProfiles Ubiquitin domain profile. 33 106 IPR000626 GO:0005515
Lal3g1551 584 ProSiteProfiles Ubiquitin domain profile. 113 170 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal3g1551 Lal-Chr3 21271066 21274425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal3g1551 33 579 Acyl Lipid Metabolism Gene Families AT5G24240 55.776 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal3g1551 - - gmx:100791631 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal3g1551 3 21271066 21274425 Lal17g0563 17 4010701 4014851 ECH
Lal3g1551 3 21271066 21274425 Lal3g1551 3 21271066 21274425 ECH
Lal22g0577 22 3948468 3951339 Lal3g1551 3 21271066 21274425 ECH
Lal16g0071 16 430092 433000 Lal3g1551 3 21271066 21274425 ECH
Lal15g1455 15 16768484 16771804 Lal3g1551 3 21271066 21274425 ECH
Lal16g1146 16 7819956 7827176 Lal3g1551 3 21271066 21274425 ECH
Lal23g1558 23 15637302 15642355 Lal3g1551 3 21271066 21274425 ECH
Lal5g0044 5 509648 513948 Lal3g1551 3 21271066 21274425 LSH
Lal3g1551 3 21271066 21274425 Lal18g0289 18 2366084 2369088 LSH
Lal3g1551 3 21271066 21274425 Lal6g0637 6 4151671 4154787 PCT
Lal3g1551 3 21271066 21274425 Lal22g0577 22 3948468 3951339 PCT
Lal3g1551 3 21271066 21274425 Lal18g0289 18 2366084 2369088 PCT
Lal6g0637 6 4151671 4154787 Lal3g1551 3 21271066 21274425 PCT
Lal22g0577 22 3948468 3951339 Lal3g1551 3 21271066 21274425 PCT
Lal18g0289 18 2366084 2369088 Lal3g1551 3 21271066 21274425 PCT