Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g1036 ATGTCATCTGCTGGTTTAAGAACTCTTAGTCCTTTTCCAAGGGAGCCATTTTTGTTTCCAAATGGCTTCCATACTCCACTGCACTTGGCTTTGGATTATGAGTCCATTTTCATATATCTATCTTTCTCTGGGTCATTGACACCGATGCGTGTTCTACCACGTGATACCATTGAGTCAGTCAAACTCAAAATCAAAAAGAGTGAGGGGCTTCCTTTGTTGACAAACAAGCAAAAACTGGTTTGTGGTGGCCGAGAGCTAGCGCGGAGCGATTCTCTGCTCAAGGACTATGGGGTCACAGAAGGGAATGTTATGCATTTGGTTATCAGGCTGTCAGATCTTCAGACCATCAATTTGAGAACCTCTTGTGGGAAGGAGTTTTCATTTCAGGTGGAAAGATGTAGGGATGTTGGGCATGTGAAGCAACAGATTGCGAAAAAGGAGAAGCGATTTGCTGATCCTGAACAGCAGGAAGTTGTGTGTAATGGGGAATGTCTTGAGGATCAATGGCTTATTGGTGATATCAGCGGCAAACATAATGATGTAGTGATGCATCTTTTTGTTAGAGAGAAATATGCAGAAGTTAAAACAGGAATGGATGAGTTGTCCATTGTGGCAACAGAATTGAATGATATGAAAAATAATGATGTTGATGGAGACAATTATAGGAGAAAATATAATGGCACTAAAGAAAATACGAGGGATTATGAAGCAGTCGACCAAATTGTGCCGAGAAAATCTCTTGATAAAGATCTTCTCTTGGAGCCAATTGTTGTTAACCCCAAAGTTGAATTAGCTTTAGAGATTTGGAATATGATAAACTCTTCATATGATGGACTAGATAGTGGACATTATCCTATTAGATCTGCAGAGGGTACTGGAGGAGCTTACTTTATGCTTGATTCCACAGGGCAAAAGTATGTATCCGTTTTTAAGCCTATTGATGAAGAGCCAATGGCTGTGAATAACCCCAGAGGCCTGCCTTTGTCATTAGATGGCGAAGGCTTGAAAAAGGGTACAATAGTTGGTGAAGGAGCACTCAGGGAAGTTGCAGCTTATATTTTGGACCATCCAATTAGTGGGCACCGCTCATTATTTGGTGATGAGAAAGGCTTTGCTGGGGTTCCCCCAACTATTATGGTTAAGTGCTTACATAAAGGATTTAACCATCCAGGGGGCTTAACTGCTAAGATTGGCTCCATGCAAATGTTCGTGGAGAACAGCGGAAGTTGTGAGGATATGGGCCCTGGAGCCTTCCCAGTAAATGAAGTTCATAAAATTACCGTGTTGGACATGAGACTGGCGAATGCAGATAGGCATGCTGGGAATATTTTGATCAGCAAAGAGAAGGAAAATGACCAGGCTGTTTTGATTCCAATTGACCATGGCTACTGCTTGCCCACAAGTTTTGAGGATTGCACCTTTGAATGGCTTTATTGGCCTCAAGCTCGCCAGCCATACTCCAAAGAGACTATTAACTACATAAAATCATTGGATGCTGAAGAAGATATCGCCCTTCTGAAGTTTCATGGATGGGATCTTCCAGTTGAATGTGCTCGCACTCTTCGAATCTCGACCATGCTTCTGAAGAAAGGAGTGGATAGAGGGATGACCCCCTATGCCATTGGAAGCTTGATGTGCAGAGAATCCTTGAACAAGGACTCAGTGATTGAGGGCATTGTCCAAGAATCATTGGATTCTGTTCTTCCTGGCACAAGTGAAGTTACATTTATGGATGCTGTTTCCAACATCATGGACCAGCGCCTAGATGAGATTGCCAATTCCATATCTTAA 1791 0.4249 MSSAGLRTLSPFPREPFLFPNGFHTPLHLALDYESIFIYLSFSGSLTPMRVLPRDTIESVKLKIKKSEGLPLLTNKQKLVCGGRELARSDSLLKDYGVTEGNVMHLVIRLSDLQTINLRTSCGKEFSFQVERCRDVGHVKQQIAKKEKRFADPEQQEVVCNGECLEDQWLIGDISGKHNDVVMHLFVREKYAEVKTGMDELSIVATELNDMKNNDVDGDNYRRKYNGTKENTRDYEAVDQIVPRKSLDKDLLLEPIVVNPKVELALEIWNMINSSYDGLDSGHYPIRSAEGTGGAYFMLDSTGQKYVSVFKPIDEEPMAVNNPRGLPLSLDGEGLKKGTIVGEGALREVAAYILDHPISGHRSLFGDEKGFAGVPPTIMVKCLHKGFNHPGGLTAKIGSMQMFVENSGSCEDMGPGAFPVNEVHKITVLDMRLANADRHAGNILISKEKENDQAVLIPIDHGYCLPTSFEDCTFEWLYWPQARQPYSKETINYIKSLDAEEDIALLKFHGWDLPVECARTLRISTMLLKKGVDRGMTPYAIGSLMCRESLNKDSVIEGIVQESLDSVLPGTSEVTFMDAVSNIMDQRLDEIANSIS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g1036 596 SMART ubq_7 114 188 IPR000626 GO:0005515
Lal18g1036 596 SMART ubq_7 36 109 IPR000626 GO:0005515
Lal18g1036 596 ProSiteProfiles Ubiquitin domain profile. 34 109 IPR000626 GO:0005515
Lal18g1036 596 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 595 - -
Lal18g1036 596 CDD Ubl_ubiquitin_like 116 183 - -
Lal18g1036 596 Pfam Phosphatidylinositol 3- and 4-kinase 291 540 IPR000403 -
Lal18g1036 596 Pfam Ubiquitin family 116 189 IPR000626 GO:0005515
Lal18g1036 596 Pfam Ubiquitin family 38 110 IPR000626 GO:0005515
Lal18g1036 596 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 595 IPR044571 -
Lal18g1036 596 SUPERFAMILY Ubiquitin-like 103 184 IPR029071 -
Lal18g1036 596 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 282 575 IPR000403 -
Lal18g1036 596 SUPERFAMILY Ubiquitin-like 35 110 IPR029071 -
Lal18g1036 596 Gene3D - 112 196 - -
Lal18g1036 596 Gene3D - 35 111 - -
Lal18g1036 596 SUPERFAMILY Protein kinase-like (PK-like) 428 591 IPR011009 -
Lal18g1036 596 ProSiteProfiles Ubiquitin domain profile. 114 183 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g1036 Lal-Chr18 13348093 13352155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g1036 1 592 Acyl Lipid Metabolism Gene Families AT5G24240 53.099 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g1036 - - gmx:100815111 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1036 18 13348093 13352155 Lal17g0563 17 4010701 4014851 ECH
Lal18g1036 18 13348093 13352155 Lal18g1036 18 13348093 13352155 ECH
Lal5g0044 5 509648 513948 Lal18g1036 18 13348093 13352155 ECH
Lal16g0071 16 430092 433000 Lal18g1036 18 13348093 13352155 ECH
Lal15g1455 15 16768484 16771804 Lal18g1036 18 13348093 13352155 ECH
Lal16g1146 16 7819956 7827176 Lal18g1036 18 13348093 13352155 ECH
Lal23g1558 23 15637302 15642355 Lal18g1036 18 13348093 13352155 ECH