Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0289 ATGTCATCTGCTGGTGTCAAAACTCTTAGTCCTGTTCCAATTGAACCATTCCATAATACACCATCATGGGCACCATGCTTGTCTATGGAACACAAATTCATTTCCATATATCTCTCATATTTGAGGTCGTTGACACCGATTCGTGTTATGGAATGTGACACCATTGAGTCTGTGAAGTTCAAAATCGAAAGGTGCGAGAGCCTTCCTTTCTTAACAAACAAGCATAAGTTGGTTTATGCTGGCCTGGAACTAGCGCGGAGTGGTTCGCTGCTCAAGGCTTATGGTGTTACAGAAGGGAATCTTTTGCATTTGATAATCAAACTTTCAGATCTTCAGGTCATCAATGTGAAAACTTCTTGTGGGAAGGAATTCATATTTCAGGTCAAACGAGGTAGGGATGTCGGGTACATAAAGAGATGGATTGCGAAAAGGGGGAAAGGTTTTGCTGATACTGAAGAGCAGGAAGTTGTGTGTAAAGGTGAAAGGCTTGAGGATCAAAGGCTTATTGATGACATCTGCAGCAAACATAATGACGCAGTGGTGCATCTTTTTGTTAGAAGAAGGCATATAAAAGTTCAGAGACGACCACTCGAGTTGTCCATTGTAGCAACAGCTTTGAGTGATGAGAAAGATTTTGATGTTGGCAAAGAAGGTACTATAAGGAAGTATGACGCCATTCAACGAGTTGTGCCGATGAAGCGTCCTGATAGAGATTTTATTTTGGAGCCGATTACTGTTAACCCTAAAGTTGAATTAGCCTCAGGGATTTGGGATATGATAAACTCTACATATGATGGACTGGATAGAGGAAAGTATCCAAACCGATCAGAAGAGGGTACAGGGGGAGCTTACTTCATGCTCGACTCGACCGGGCAGAAGTATGTGTCTGTTTTTAAGCCCATTGATGAAGAGCCATTGGCTGTGAACAACCCTCGAGGTCTACCTTTGTCGTTAGATGGTGAAGGCTTAAAGAAGGGTACAAGAGTTGGTCAAGGAGCATTTAGAGAAGTTGCAGCATACATTTTGGACCATCCGATGAGTGGCCGCCGCTCATTATTTGGTGACGGGAAGGGCTTTGCTGGTGTTCCACTGACATTTATGGTTAAGTGCTTGCATAAAGGATTTAACTATCCAGGATATTTGACTGCTAAGATCGGGTCAATGCAATTGTTTGTGGAGAATAATGGAAGCTGTGAAGATATGGGCCCTGGAGCTTTTCCGGTTAAGGAAGTGCATAAAATTTCTGTATTGGACATACGTCTTGCAAATGCAGATAGGCATGCTGGGAATATTTTGCTCGGCGCAGACGAGGACAATGACAAAGCTGTTCTGATTCCAATTGATCATGGATACTGCTTGCCCACAAGTTTTGAAGATTGTACCTTTGAATGGCTTTACTGGCCACAAGCTCGCCAGCCATACTCGGCAGAAACCGTTGAGTACATAAACTCATTGGACGCTGAAGAAGATATCGCGCTTTTGAAGTTTCATGGATGGGATCTGCCAGTTGAATGTGCCCGCACCCTTCTAATCTCAACCATGCTGTTGAAGAAAGGCGTAGCGAGAAAATTGACCCCTTTCACCATCGGAAGCATCATGTGCAGGGAATCCTTGAATAAGGAATCTATGATTGAGGAAATAGTACAAGCAGCATTGGATTCTGTTCTTCCTGGCACAAGTGAAGCTACATTTCTGGATTCTGTTTCCGAAATCATGGACCGGCGCTTAGATGACATTGCAAGCAGCTCCCCTTTATAA 1758 0.4346 MSSAGVKTLSPVPIEPFHNTPSWAPCLSMEHKFISIYLSYLRSLTPIRVMECDTIESVKFKIERCESLPFLTNKHKLVYAGLELARSGSLLKAYGVTEGNLLHLIIKLSDLQVINVKTSCGKEFIFQVKRGRDVGYIKRWIAKRGKGFADTEEQEVVCKGERLEDQRLIDDICSKHNDAVVHLFVRRRHIKVQRRPLELSIVATALSDEKDFDVGKEGTIRKYDAIQRVVPMKRPDRDFILEPITVNPKVELASGIWDMINSTYDGLDRGKYPNRSEEGTGGAYFMLDSTGQKYVSVFKPIDEEPLAVNNPRGLPLSLDGEGLKKGTRVGQGAFREVAAYILDHPMSGRRSLFGDGKGFAGVPLTFMVKCLHKGFNYPGYLTAKIGSMQLFVENNGSCEDMGPGAFPVKEVHKISVLDIRLANADRHAGNILLGADEDNDKAVLIPIDHGYCLPTSFEDCTFEWLYWPQARQPYSAETVEYINSLDAEEDIALLKFHGWDLPVECARTLLISTMLLKKGVARKLTPFTIGSIMCRESLNKESMIEEIVQAALDSVLPGTSEATFLDSVSEIMDRRLDDIASSSPL 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0289 585 Pfam Phosphatidylinositol 3- and 4-kinase 279 529 IPR000403 -
Lal18g0289 585 SUPERFAMILY Protein kinase-like (PK-like) 415 579 IPR011009 -
Lal18g0289 585 Gene3D - 113 189 - -
Lal18g0289 585 SMART ubq_7 112 186 IPR000626 GO:0005515
Lal18g0289 585 SMART ubq_7 34 107 IPR000626 GO:0005515
Lal18g0289 585 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 270 563 IPR000403 -
Lal18g0289 585 ProSiteProfiles Ubiquitin domain profile. 114 171 IPR000626 GO:0005515
Lal18g0289 585 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 582 IPR044571 -
Lal18g0289 585 CDD Ubl_ubiquitin_like 114 184 - -
Lal18g0289 585 ProSiteProfiles Ubiquitin domain profile. 34 107 IPR000626 GO:0005515
Lal18g0289 585 SUPERFAMILY Ubiquitin-like 45 111 IPR029071 -
Lal18g0289 585 Gene3D - 27 112 - -
Lal18g0289 585 Pfam Ubiquitin family 46 108 IPR000626 GO:0005515
Lal18g0289 585 Pfam Ubiquitin family 114 188 IPR000626 GO:0005515
Lal18g0289 585 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 582 - -
Lal18g0289 585 SUPERFAMILY Ubiquitin-like 92 188 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0289 Lal-Chr18 2366084 2369088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0289 34 580 Acyl Lipid Metabolism Gene Families AT5G24240 54.496 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0289 - - gmx:100791631 931.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0289 18 2366084 2369088 Lal17g0563 17 4010701 4014851 ECH
Lal18g0289 18 2366084 2369088 Lal18g0289 18 2366084 2369088 ECH
Lal6g0637 6 4151671 4154787 Lal18g0289 18 2366084 2369088 ECH
Lal16g0071 16 430092 433000 Lal18g0289 18 2366084 2369088 ECH
Lal15g1455 15 16768484 16771804 Lal18g0289 18 2366084 2369088 ECH
Lal16g1146 16 7819956 7827176 Lal18g0289 18 2366084 2369088 ECH
Lal23g1558 23 15637302 15642355 Lal18g0289 18 2366084 2369088 ECH
Lal5g0044 5 509648 513948 Lal18g0289 18 2366084 2369088 LSH
Lal3g1551 3 21271066 21274425 Lal18g0289 18 2366084 2369088 LSH
Lal6g0637 6 4151671 4154787 Lal18g0289 18 2366084 2369088 LSH
Lal22g0577 22 3948468 3951339 Lal18g0289 18 2366084 2369088 LSH
Lal5g0044 5 509648 513948 Lal18g0289 18 2366084 2369088 PCT
Lal3g1551 3 21271066 21274425 Lal18g0289 18 2366084 2369088 PCT
Lal18g0289 18 2366084 2369088 Lal6g0637 6 4151671 4154787 PCT
Lal18g0289 18 2366084 2369088 Lal22g0577 22 3948468 3951339 PCT
Lal18g0289 18 2366084 2369088 Lal18g0289 18 2366084 2369088 PCT
Lal6g0637 6 4151671 4154787 Lal18g0289 18 2366084 2369088 PCT
Lal22g0577 22 3948468 3951339 Lal18g0289 18 2366084 2369088 PCT
Lal18g0289 18 2366084 2369088 Lal5g0044 5 509648 513948 PCT
Lal18g0289 18 2366084 2369088 Lal3g1551 3 21271066 21274425 PCT