Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0637 ATGTCATCTGCTGGTTTAAGCACTCTTAGCCCTGTTCCAAGGGAGCCATTGTTCTTTCCAAATGGATTCCATACTCCACTGCACTTGGCTTTGGACTATGAGTCCATTTTCATATATCTCTCTTTCTCTGGGTCATTGACACCAATGTGTGTTCTGCCCTGTGATACCATTGAGTCAGTAAAACTCAAAATCAAAAAGAGTGAAGGGCTTCCTTCATTGACAAACAAGCAAAAATTGGTATGCCGTGGCCGGGAGCTATCCCGGAGCAATTCTTTGCTCAAGGACTATGGGGTTACGGAAGGGAATGTTCTGCATTTGGTTATGAGGCTATCGGATCTCCAAACCATCAATGTGAGAACTTCTTGTGGGAAGGAGTTTACGTTTCAGGTGGAAAGATGTAGGGATGTTGGGTATGTTAAGCAACAGATTGCGAAAAAGGAGAAGCAGTTTGCTGATCCTGAACAGCAGGAAGTTGTGTGTAATGGGGAACAGCTTGAGGATCAGTGGCTTATTGATGATATCTGCACCAAACATAACAATGTAGTCTTACATCTTTTTGTTAGAGAGAAATATGCAGAAGTTAAGACAGGAATGGATGAGTTGTCCATTGTGACAACGGAGTTGAATGATAGGAAAAATAATGATGTTGGTGGAGACAGTTATTGGAGAAAATTTGATGTTAACAAAGATACAAGGGAACATGAAGCTGTTGAGCAAGTTGTGCCGATAAAACCTCTTGATAGTGATCTTCTATTGGAGCCAATTATTGTTAACCCCAAAGTTGAATTAGCTTCAGAGATTTGGAATATGATACACTCTTCATATGATGGACTAGATAGTGGACATTATCCTATCAGATCTGCAGAGGGTACTGGAGGAGCTTACTTTATGCTTGATTCCACGGGGCAAAAGTATGTATCCGTTTTTAAGCCTATTGATGAAGAGCCAATGGCTGTGAATAACCCTAGAGGTTTGCCTTTGTCATTAGATGGTGAAGGCTTGAAAAAGGGTACAAGAGTTGGTCAAGGAGCATTCAGGGAAGTTGCAGCTTATATCTTGGACCATCCAATTAGTGGACACCGTTCATTATTTAGTGATGAGAAGGGCTTTGCCGGGGTTCCCCCAACTGTTATGGTTAAGTGCTTGCATAAAGGATTTAACCATTCAGGGGACTTCACTGCTAAGATCGGCTCCTTGCAAATGTTCATGGAGAACAGTGGAAGTTGTGAAGATATGGGCCCTGGGGCTTTCCCAGTGAATGAAGTTCATAAAATTACGGTTTTGGACATGAGACTGGCGAACGCTGATAGGCATGCTGGGAATATTTTGATCAGCAAAGAGGAGGAAAATGGCCAGGCTGTTCTGATTCCAATCGACCATGGCTACTGCTTGCCTACAAGTATTCTGCAGAAATGTTTTAGAAATTCAAACTTTGAGGATTGCACCTTTGAATGGCTTTATTGGCCTCAAGCTCGCCAGCATTACTCCGCAGAGACTATTGACTATATAAAATCACTGGATGCTGAAGAAGATATCGCCCTCTTACAGTTTCATGGATGGGATCTGCCAGTTGAATGCACTCGCACTCTTCAAATCTCAACCATGCTTCTGAAGAAAGGAGTGGATAGAGGAATGACCCCCTTTGCAATTGGAAGCCTTATGTGCAGAGAATCATTGAACAAGGACTCAGTGATTGAGGGCATTGTCCAAGAAGCATTGGATTCTGTTCTTCCTGGCACAAGTGAAGCTACATTTCTGGATGCGGTTTCCTACGTCATGGACCAGCGGCTTGATGAGATTGCTAATTCCATCTCTTAA 1818 0.4274 MSSAGLSTLSPVPREPLFFPNGFHTPLHLALDYESIFIYLSFSGSLTPMCVLPCDTIESVKLKIKKSEGLPSLTNKQKLVCRGRELSRSNSLLKDYGVTEGNVLHLVMRLSDLQTINVRTSCGKEFTFQVERCRDVGYVKQQIAKKEKQFADPEQQEVVCNGEQLEDQWLIDDICTKHNNVVLHLFVREKYAEVKTGMDELSIVTTELNDRKNNDVGGDSYWRKFDVNKDTREHEAVEQVVPIKPLDSDLLLEPIIVNPKVELASEIWNMIHSSYDGLDSGHYPIRSAEGTGGAYFMLDSTGQKYVSVFKPIDEEPMAVNNPRGLPLSLDGEGLKKGTRVGQGAFREVAAYILDHPISGHRSLFSDEKGFAGVPPTVMVKCLHKGFNHSGDFTAKIGSLQMFMENSGSCEDMGPGAFPVNEVHKITVLDMRLANADRHAGNILISKEEENGQAVLIPIDHGYCLPTSILQKCFRNSNFEDCTFEWLYWPQARQHYSAETIDYIKSLDAEEDIALLQFHGWDLPVECTRTLQISTMLLKKGVDRGMTPFAIGSLMCRESLNKDSVIEGIVQEALDSVLPGTSEATFLDAVSYVMDQRLDEIANSIS 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0637 605 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 604 IPR044571 -
Lal6g0637 605 CDD Ubl_ubiquitin_like 116 186 - -
Lal6g0637 605 ProSiteProfiles Ubiquitin domain profile. 114 182 IPR000626 GO:0005515
Lal6g0637 605 Gene3D - 115 191 - -
Lal6g0637 605 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 604 - -
Lal6g0637 605 Pfam Phosphatidylinositol 3- and 4-kinase 290 549 IPR000403 -
Lal6g0637 605 Gene3D - 35 114 - -
Lal6g0637 605 SUPERFAMILY Ubiquitin-like 109 188 IPR029071 -
Lal6g0637 605 SMART ubq_7 36 109 IPR000626 GO:0005515
Lal6g0637 605 SMART ubq_7 114 188 IPR000626 GO:0005515
Lal6g0637 605 Pfam Ubiquitin family 40 110 IPR000626 GO:0005515
Lal6g0637 605 Pfam Ubiquitin family 116 189 IPR000626 GO:0005515
Lal6g0637 605 SUPERFAMILY Ubiquitin-like 35 110 IPR029071 -
Lal6g0637 605 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 281 584 IPR000403 -
Lal6g0637 605 ProSiteProfiles Ubiquitin domain profile. 55 109 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0637 Lal-Chr6 4151671 4154787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0637 1 601 Acyl Lipid Metabolism Gene Families AT5G24240 51.815 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0637 - - gmx:100815111 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0637 6 4151671 4154787 Lal17g0563 17 4010701 4014851 ECH
Lal6g0637 6 4151671 4154787 Lal6g0637 6 4151671 4154787 ECH
Lal6g0637 6 4151671 4154787 Lal18g0289 18 2366084 2369088 ECH
Lal16g0071 16 430092 433000 Lal6g0637 6 4151671 4154787 ECH
Lal15g1455 15 16768484 16771804 Lal6g0637 6 4151671 4154787 ECH
Lal16g1146 16 7819956 7827176 Lal6g0637 6 4151671 4154787 ECH
Lal23g1558 23 15637302 15642355 Lal6g0637 6 4151671 4154787 ECH
Lal6g0637 6 4151671 4154787 Lal22g0577 22 3948468 3951339 LSH
Lal6g0637 6 4151671 4154787 Lal18g0289 18 2366084 2369088 LSH
Lal5g0044 5 509648 513948 Lal6g0637 6 4151671 4154787 PCT
Lal3g1551 3 21271066 21274425 Lal6g0637 6 4151671 4154787 PCT
Lal18g0289 18 2366084 2369088 Lal6g0637 6 4151671 4154787 PCT
Lal6g0637 6 4151671 4154787 Lal5g0044 5 509648 513948 PCT
Lal6g0637 6 4151671 4154787 Lal3g1551 3 21271066 21274425 PCT
Lal6g0637 6 4151671 4154787 Lal18g0289 18 2366084 2369088 PCT