Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0241 ATGCCCAACCATTCTACTTTATGCTTCTTCTTTCTTTATCTCTTCCTCGTCTGCTGCTCGGGAATTCTTGCGGGATTTTCATACCGTGAAAGAGGAGATGCTGGGACTATATTGTTCCTCAAACAAAAAGTGCCAGTCTCTCATATTCGAATTTTTGTCACGGATCCTAGAACTTTGGGCACTCTCACCAAATCGCACGAGTCGCTTGATTTCTTCCTCAATGAAAACCTCGTAAAAGCTTTGATTAGCTCAAATCCATCTGCAGTTTCATGGCTGAAAACCAATCTTGTAGATCTTCTTCCAAAAGCTGAAATCAATAGCATTATAACTAGTTGTGGGAATTTAGGCCAAAATGAGGTACCATTACTGGTTTCTGCTCTAAGAGATATTCACTCAGTTCTCAGCAAGCTTCATTTAGGCAGGGAAGTGAAGGTCTCAGTAGCATTTCCTCTGTCATTCTTAGAGAAGTGGAAAAATTCAAATGAGAATGATCTCCATAGGATTCTGTCATTTATAAAGGAAACAAATTCCTTTGTCATGATAGAAGGCAGCATTGATGGGGAACGTCTTGTCCAGTCTGCTATAGAACGAGCTTCTCATGCTGCTTCTATCCTTCCTCACAAAGATGTTCCCTTGGTTCTAACAGCAAAAATCTCAGCAATTCCCAGTTCAATGGAACTACCTCAATTCAGCCAAACACTATCCAAACATCTTGAAGCAACAAGCTCTATGGTCAGTGGTAGAGTAATGACATTTTATGCAGAAGTACATGGAACAGAAGCTTTTGAGCATGAACGTCTCAAAAGGGAAGAAGAGGAAGACACCTTTCCTTTGTCCCGCAGAGAAATGCTAAGCAAATTCCACATCAGAAGAACTCTAGATGAAATTTATCCCACAAATCCAACTTCAGCTACGCCAGTAGTTACAACCCCAGATGCACCAACCATTATCACAGTTCCCTCAACCATTCCTGCTCCTCCCACCAATCCTACTGCAATGCCTGCAGTGACAGTTCCTACCACAACCTCTGTGCCATTACCTCCCACGAATCCGGCCAATCCCGGGACAACCCCGATAACAGTTCCGGGGACACAGCCGGCAACATATTATCCACCCCCATCAGGAGGTGTTCCTGTAGTGAGCTCCATTCCACCTCCTGCAAACAGTAATGCTCCGGCCACAGGAGGACAGAGTTGGTGTGTGGCCAAGACTGGAGCTGCAGAAACTGCTCTTCAATCAGCATTGGACTATGCTTGTGGAATGGGTGGTGCAGATTGTTCACAAATCCAGCAGAGTGGGAATTGTTACAATCCAAATACTCTTGAAAACCATGCTTCTTATGCCTTCAACAGCTACTACCAGAAAAATCCAGCACCAACAAGCTGTGACTTTGGAGGGGCCGCCACCCTAGTTAACGTGAATCCAAGCTCAGGTTCTTGCATTTTCCCATCATCCTCTACCTCTCTTTCATCGTCAACACCAACAACAACGACATCATCAACTCCCACCCCCACTCCAACTACATCATCATCATCATCAGGGACAGACATATCAGGCTATGGTACCCCACCTTCAGTGTTAAATTCAAGCAGCAGCTCAGCATCAAGCACAGGTACCTCACCATTTTACGGGTCCGAAAGTCCTACGGGTGCAAACACCGCGTCATCATCCCATTCCACCAGTGTGCAGCCTTTTCTAAGGTTCATTGTTCTGGTGATATCATTGGTCACTGGAAAACTTAGCATGTACCCATAG 1755 0.449 MPNHSTLCFFFLYLFLVCCSGILAGFSYRERGDAGTILFLKQKVPVSHIRIFVTDPRTLGTLTKSHESLDFFLNENLVKALISSNPSAVSWLKTNLVDLLPKAEINSIITSCGNLGQNEVPLLVSALRDIHSVLSKLHLGREVKVSVAFPLSFLEKWKNSNENDLHRILSFIKETNSFVMIEGSIDGERLVQSAIERASHAASILPHKDVPLVLTAKISAIPSSMELPQFSQTLSKHLEATSSMVSGRVMTFYAEVHGTEAFEHERLKREEEEDTFPLSRREMLSKFHIRRTLDEIYPTNPTSATPVVTTPDAPTIITVPSTIPAPPTNPTAMPAVTVPTTTSVPLPPTNPANPGTTPITVPGTQPATYYPPPSGGVPVVSSIPPPANSNAPATGGQSWCVAKTGAAETALQSALDYACGMGGADCSQIQQSGNCYNPNTLENHASYAFNSYYQKNPAPTSCDFGGAATLVNVNPSSGSCIFPSSSTSLSSSTPTTTTSSTPTPTPTTSSSSSGTDISGYGTPPSVLNSSSSSASSTGTSPFYGSESPTGANTASSSHSTSVQPFLRFIVLVISLVTGKLSMYP 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0241 584 PANTHER BETA-1,3 GLUCANASE 335 497 IPR044788 -
Lele05g0241 584 SMART X8_cls 398 482 IPR012946 -
Lele05g0241 584 Gene3D - 394 499 - -
Lele05g0241 584 MobiDBLite consensus disorder prediction 484 557 - -
Lele05g0241 584 FunFam Glucan endo-1,3-beta-glucosidase 4 393 486 - -
Lele05g0241 584 Pfam X8 domain 399 469 IPR012946 -
Lele05g0241 584 Gene3D Glycosidases 30 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0241 Lele-ChrLele05 1346686 1349052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0241 34 485 Glycoside Hydrolase AT2G05790 28.313 4.25e-38 145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0241 05 1346686 1349052 Lele13g2196 13 28433734 28435191 CCT
Lele05g0241 05 1346686 1349052 Lele14g2133 14 26821087 26822407 CCT
Lele05g0241 05 1346686 1349052 Lele15g0216 15 1238134 1239421 CCT
Lele05g0241 05 1346686 1349052 Lele16g0224 16 1242274 1243583 CCT
Lele13g2205 13 28476378 28477606 Lele05g0241 05 1346686 1349052 CCT
Lele14g2142 14 26864015 26865245 Lele05g0241 05 1346686 1349052 CCT
Lele15g0209 15 1201651 1202879 Lele05g0241 05 1346686 1349052 CCT
Lele16g0216 16 1205154 1206387 Lele05g0241 05 1346686 1349052 CCT
Lele05g0241 05 1346686 1349052 Lele05g0241 05 1346686 1349052 ECH
Lele05g0241 05 1346686 1349052 Lele07g0253 07 1381216 1383585 hybridization
Lele05g0241 05 1346686 1349052 Lele08g0056 08 347374 356600 hybridization