Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0224 ATGGCTACTCCTCTTCCTTCTTTCTTCCTCCTCCTTCTCTGCTGTTCCGGAGTCATGCTGCTCATCTTCTCCGATCGCGACTTTTCAACCCCGCCTGCTGCTGATGTCCTCCTCTCTCACATTCCGATGATCGGCAAGATCCTCCCCAGAAGAACTTTAGGTGACACCACCGTCATCACTGTACCTGCCAGCAATCCTGTCACTGTCTACCCCACCAATCCATCTGCCGTGCCCGTCACTGTACCTTCCTACAATTCCCCTGTTCCAGTTGCGGCTTATCCTCCCCCGTCTCCGCCGTCGACCGGTGTTCCGGTCACGAATTCTCAACCGCCACCTTCTCCAACGGCCACTAATGCTGCTCCTGCCGTTTCTGGGCAGAAGTGGTGTGTGGCTAAATCTGGAGTTTCACAATCTGTTCTTCAGTCCGCACTTGACTATGCTTGTGGAATGGGAGGCGCCGATTGCTCTCAGATACAGCAGGGAGGGAGCTGTTACAACCCCAACAGTCTGCAAAACCACGCGTCTTATGCCTTCAACGCCTACTACCAAAAGAACCCCGCTCCTACCAGCTGTGACTTCGGGGGCTCTGCTACCTTAGTTACCGCCAACCCTAGTACGGGTTCTTGCGTTTACGCGTCGTCGTCGTCTTCTTCGTCACCATCGCCGCCAACAACTCCGACGCCATCGTCCCCAACAACTCCGTCTTCTTCTTCTTCTTCGTCGCCTCCTACATCTACTTCATCATCATCATCACCACCGACAAAATCTCCAACTCCAACAACACCGTCATCACCAGGAGGAGGTGCTTTTGACTATGGTAGCCCAAAATCTTCGGCGCCGTTGAATTCGAGCAATCCGACGTCAGGTTCTATGCCACTTATCGGGTCGCAAAGCCCACCTTCCACCTCATGGTCACATTCAAGCGATGTCAGACCATTTGTTGCCTCCATTCTTGTGCTGATATCGCTGGTCACTGCGAAACTCAACATGCGCACTTAG 999 0.5345 MATPLPSFFLLLLCCSGVMLLIFSDRDFSTPPAADVLLSHIPMIGKILPRRTLGDTTVITVPASNPVTVYPTNPSAVPVTVPSYNSPVPVAAYPPPSPPSTGVPVTNSQPPPSPTATNAAPAVSGQKWCVAKSGVSQSVLQSALDYACGMGGADCSQIQQGGSCYNPNSLQNHASYAFNAYYQKNPAPTSCDFGGSATLVTANPSTGSCVYASSSSSSSPSPPTTPTPSSPTTPSSSSSSSPPTSTSSSSSPPTKSPTPTTPSSPGGGAFDYGSPKSSAPLNSSNPTSGSMPLIGSQSPPSTSWSHSSDVRPFVASILVLISLVTAKLNMRT 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0224 332 SMART X8_cls 127 211 IPR012946 -
Lele16g0224 332 FunFam Glucan endo-1,3-beta-glucosidase 4 122 215 - -
Lele16g0224 332 MobiDBLite consensus disorder prediction 95 120 - -
Lele16g0224 332 MobiDBLite consensus disorder prediction 210 308 - -
Lele16g0224 332 MobiDBLite consensus disorder prediction 276 308 - -
Lele16g0224 332 Gene3D - 122 221 - -
Lele16g0224 332 PANTHER BETA-1,3 GLUCANASE 54 232 IPR044788 -
Lele16g0224 332 MobiDBLite consensus disorder prediction 95 117 - -
Lele16g0224 332 MobiDBLite consensus disorder prediction 231 254 - -
Lele16g0224 332 Pfam X8 domain 127 198 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0224 Lele-ChrLele16 1242274 1243583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0224 124 211 Glycoside Hydrolase AT4G26830 55.056 7.34e-28 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0241 05 1346686 1349052 Lele16g0224 16 1242274 1243583 CCT
Lele13g2196 13 28433734 28435191 Lele16g0224 16 1242274 1243583 hybridization
Lele14g2133 14 26821087 26822407 Lele16g0224 16 1242274 1243583 hybridization