Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2142 ATGGCTCCCCATATCGGCCCCGCCACCCAGGCCAAGGCCACCGGGAGTCACCGCGCCTTCGTGACTTTCCTCGCCGGCAATGGTGACTACGTGAAGGGAGTGGTGGGACTGGCCAAAGGTCTGAGAAAGGTGAACAGCAAGTACCCTCTGGTGGTTGCTATTCTGCCGGATGTTCCCCATGAGCACCGTCAGATCCTAATCTCTCAGGGCTGCATCGTCCGCGAGATCGAGCCAGTCCACCCTCCTGAGAACCAAACCCAGTTCGCCATGGCTTATTATGTCATCAATTACTCCAAGCTTCGTATCTGGGAGTTCGTGGAGTACAGCAAGATGATCTATCTCGATGGAGATATCCAAGTGTTCGACAACATAGACCACCTTTTTGATCTGGCAAACGGCTACTTCTACGCCGTGATGGACTGTTTCTGCGAGAAAACCTGGAGCCACACCCCACAGTACAAGATCGGGTACTGCCAGCAGTGCCCTGATAAGGTTCAGTGGCCAGCTGAGTTTGGACCCAAGCCTCCACTATACTTCAACGCCGGCATGTTTGTTTACGAGCCCAATCTCTCCACCTACCGTGACCTCCTCAAAACCCTCCAAGTCACCGAGCCTACTTCCTTTGCTGAGCAGGACTTCCTGAACATGTACTTCAAGGACAAATATAGGCCCATATCGAACGTGTACAACCTTGTGCTGGCCATGCTGTGGCGTCATCCTGAGAACGTGGAGCTCCAGAAAGTGAAAGTGGTTCACTACTGTGCTGCTGTTAGTATATCCTGTGTAGGGTCAAAGCCATGGAGATACACGGGGAAAGAGGAACACATGGACAGGGAAGACATCAAGATGCTGGTGAAGAAATGGAGGGATATATACGAGGATGAGACTCTGGACTATGTGAACCCAGTGAACGTGGAGCGGATTCAGGAGGCACTGTCCGAAGCTGGTCGGGTTGCATTCGTTCGCGCCCCGTCTGCCGCTTAG 984 0.5315 MAPHIGPATQAKATGSHRAFVTFLAGNGDYVKGVVGLAKGLRKVNSKYPLVVAILPDVPHEHRQILISQGCIVREIEPVHPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFDNIDHLFDLANGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVQWPAEFGPKPPLYFNAGMFVYEPNLSTYRDLLKTLQVTEPTSFAEQDFLNMYFKDKYRPISNVYNLVLAMLWRHPENVELQKVKVVHYCAAVSISCVGSKPWRYTGKEEHMDREDIKMLVKKWRDIYEDETLDYVNPVNVERIQEALSEAGRVAFVRAPSAA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2142 327 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 16 301 IPR029044 -
Lele14g2142 327 SUPERFAMILY Nucleotide-diphospho-sugar transferases 21 298 IPR029044 -
Lele14g2142 327 CDD GT8_Glycogenin 18 294 - -
Lele14g2142 327 PANTHER GLYCOGENIN SUBFAMILY MEMBER 10 295 - -
Lele14g2142 327 FunFam Hexosyltransferase 16 300 - -
Lele14g2142 327 Pfam Glycosyl transferase family 8 22 270 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2142 Lele-ChrLele14 26864015 26865245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2142 1 327 Glycosyltransferase AT1G56600 73.607 0.0 518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g2142 14 26864015 26865245 Lele05g0241 05 1346686 1349052 CCT
Lele14g2142 14 26864015 26865245 Lele06g0056 06 373336 382632 CCT
Lele14g2142 14 26864015 26865245 Lele07g0253 07 1381216 1383585 CCT
Lele14g2142 14 26864015 26865245 Lele08g0056 08 347374 356600 CCT
Lele14g2142 14 26864015 26865245 Lele14g2142 14 26864015 26865245 ECH
Lele14g2142 14 26864015 26865245 Lele15g0209 15 1201651 1202879 hybridization
Lele14g2142 14 26864015 26865245 Lele16g0216 16 1205154 1206387 hybridization