Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0216 ATGGCCAATCCCCCTCCTTCTTTCTTCCTCCTCCTCCTCTGCTGTTCCGGAGTCATGCTGCTCATCTTCTCCGATCGCGACTTCTCAACCCCACCTGCTGCCGATGTCTTCCTCTCTCACATTCCGATGATCCGCAAGATCCTCCCCAGAAGAACTTTAGGTGACACCACCGTCATCACTGTACCTGCCAGCAATCCTGTCACCGCCTACCCCACCAATCCATCTGCCGTGCCCGTCACTGTACCTTCCTCCAATTCCCCTGTACCAGTTGTGGCTTATCCTCCCCCGTCTCCGCCGTCGACCGGTGTCCCGGTGACGAATTCTCAACCACCACCTTCTCCAACCGCCACTAATGCTGCTCCTGCCGTTTCTGGGCAGAAGTGGTGTGTGGCTAAATCTGGAGTTTCACAATCTGTTCTTCAGTCCGCACTGGACTATGCTTGTGGAATGGGAGGCGCCGATTGCTCTCAGATACAGCAGGGAGGGAGCTGTTACAACCCCAGCACTCTGCAAAACCACGCGTCTTATGCCTTCAACGCCTACTACCAAAAGAAGCCCGCTCCGACCAGTTGTGACTTCGGAGGCTCTGCTACCTTAGTTACCACCAACCCTAGTACGGGTTCTTGCATTTACGCGTCGTCGTCTTCTTCTTCTTCTCCGTCCTCGTCATCGCCGCCAACAACTCCGTCGTCTTCTTCTTCATCGTCGCCACCGACATCTACTTCATCATCATCATCACCGACAAAATCTCCAACTCCAACAACACCGTCATCACCAGGAGGAGGTGCTTTTGGCTATGGTAGCCCAACATCGTTGGCGCCGTTGAATTCGAGCAATCCGACGTCAAGTTCTATGCCACTGATCGGGTCGCAAAGCCCACCTTCAACCTCATGGTCACATTCAAGTGGTCTGAGACCCTTTGTTGCATCCACGCTAGTGCTTATATCGCTGGTCACTGCGAAGCTCAACATGCGCTCTTAG 981 0.5403 MANPPPSFFLLLLCCSGVMLLIFSDRDFSTPPAADVFLSHIPMIRKILPRRTLGDTTVITVPASNPVTAYPTNPSAVPVTVPSSNSPVPVVAYPPPSPPSTGVPVTNSQPPPSPTATNAAPAVSGQKWCVAKSGVSQSVLQSALDYACGMGGADCSQIQQGGSCYNPSTLQNHASYAFNAYYQKKPAPTSCDFGGSATLVTTNPSTGSCIYASSSSSSSPSSSSPPTTPSSSSSSSPPTSTSSSSSPTKSPTPTTPSSPGGGAFGYGSPTSLAPLNSSNPTSSSMPLIGSQSPPSTSWSHSSGLRPFVASTLVLISLVTAKLNMRS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0216 326 PANTHER BETA-1,3 GLUCANASE 58 230 IPR044788 -
Lele15g0216 326 MobiDBLite consensus disorder prediction 95 120 - -
Lele15g0216 326 SMART X8_cls 127 211 IPR012946 -
Lele15g0216 326 Gene3D - 122 224 - -
Lele15g0216 326 MobiDBLite consensus disorder prediction 270 302 - -
Lele15g0216 326 MobiDBLite consensus disorder prediction 214 261 - -
Lele15g0216 326 FunFam Glucan endo-1,3-beta-glucosidase 4 122 215 - -
Lele15g0216 326 MobiDBLite consensus disorder prediction 95 117 - -
Lele15g0216 326 MobiDBLite consensus disorder prediction 214 302 - -
Lele15g0216 326 Pfam X8 domain 127 198 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0216 Lele-ChrLele15 1238134 1239421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0216 43 211 Glycoside Hydrolase AT2G05790 37.778 2.13e-27 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0241 05 1346686 1349052 Lele15g0216 15 1238134 1239421 CCT
Lele13g2196 13 28433734 28435191 Lele15g0216 15 1238134 1239421 hybridization
Lele14g2133 14 26821087 26822407 Lele15g0216 15 1238134 1239421 hybridization