Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g2133 ATGGCTACTCCTCCTCCTTCTTTCTTCCTCCTCCTTCTCTGCTGTTCCGGAGTCATGCTGCTCATCTTCTCCGATCGCGACTTTTCAACCCCCCCTGCTGCCGATTTCTTGCTCTCTCACATTCCGATGATCGGCAAGATCCTCCCCAGAAGAACTTTAGGTGACACCACCGTCATCACTGTACCTGCCAGCAATCCTGTCACTGTCTACCCTACCAATCCATCTGCCGTGCCCGTCACTGTACCTTCCTACAATTCCCCTGTTCCAGTTGCGGCTTATCCTCCCCCGTCTCCGCCGTCGACCGGTGTTCCGGTCACGAATTCTCAACCGCCACCTTCTCCAACGGCCACTAATGCTCCTGCCGCTTCTGGGCAGAAGTGGTGTGTGGCTAAATCTGGAGTTTCACAATCTGTTCTTCAGTCCGCACTTGACTATGCTTGTGGAATGGGAGGCGCCGATTGCTCTCAGATACAGCAGGGAGGGAGCTGTTACAATCCCAACACTCTGCAAAACCACGCGTCTTATGCCTTCAACGCCTACTACCAAAAGAACTCCGCTCCTACCAGCTGTGACTTCGGGGGCTCTGCTACCTTAGTTACCACCAACCCTAGTACGGGTTCTTGCGTTTACGCGTCGTCGTCGTCGTCGTCGTCGTCTTCGTCACCATCGCCGCCAACAACTCCGACGCCATCGTCCCCAACAACTCCGTCTTCTTCTTCTTCTTCGTCGCCTCCTACATCTACTTCATCATCATCATCACCACCGACAAAATCTCCAACTCCAACAACACCGTCATCACCAGGAGGAGGTGCTTTTGGCTATGGTAGCCCAACATCTTCGGCGCCGTTGAATTCGAGCAATCCGACGTCAGGTTCCATGCCACTTATCGGGTCGCAAAGCCCACCTTCCACCTCATGGTCACATTCAAGCGATCTCAGACCATTTGTTGTCTCCACGCTTGTGCTGATATCGCTGGTCACCGCGAAACTCAACATGCGCACTTAG 1005 0.5383 MATPPPSFFLLLLCCSGVMLLIFSDRDFSTPPAADFLLSHIPMIGKILPRRTLGDTTVITVPASNPVTVYPTNPSAVPVTVPSYNSPVPVAAYPPPSPPSTGVPVTNSQPPPSPTATNAPAASGQKWCVAKSGVSQSVLQSALDYACGMGGADCSQIQQGGSCYNPNTLQNHASYAFNAYYQKNSAPTSCDFGGSATLVTTNPSTGSCVYASSSSSSSSSSPSPPTTPTPSSPTTPSSSSSSSPPTSTSSSSSPPTKSPTPTTPSSPGGGAFGYGSPTSSAPLNSSNPTSGSMPLIGSQSPPSTSWSHSSDLRPFVVSTLVLISLVTAKLNMRT 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g2133 334 MobiDBLite consensus disorder prediction 263 310 - -
Lele14g2133 334 MobiDBLite consensus disorder prediction 95 121 - -
Lele14g2133 334 MobiDBLite consensus disorder prediction 210 310 - -
Lele14g2133 334 MobiDBLite consensus disorder prediction 95 117 - -
Lele14g2133 334 PRINTS Proline rich extensin signature 224 249 - -
Lele14g2133 334 PRINTS Proline rich extensin signature 99 120 - -
Lele14g2133 334 PRINTS Proline rich extensin signature 66 82 - -
Lele14g2133 334 PRINTS Proline rich extensin signature 87 99 - -
Lele14g2133 334 MobiDBLite consensus disorder prediction 233 256 - -
Lele14g2133 334 FunFam Glucan endo-1,3-beta-glucosidase 4 121 214 - -
Lele14g2133 334 PANTHER BETA-1,3 GLUCANASE 38 228 IPR044788 -
Lele14g2133 334 Pfam X8 domain 126 197 IPR012946 -
Lele14g2133 334 Gene3D - 121 223 - -
Lele14g2133 334 SMART X8_cls 126 210 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g2133 Lele-ChrLele14 26821087 26822407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g2133 123 210 Glycoside Hydrolase AT4G26830 55.056 3.54e-28 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0241 05 1346686 1349052 Lele14g2133 14 26821087 26822407 CCT
Lele14g2133 14 26821087 26822407 Lele15g0216 15 1238134 1239421 hybridization
Lele14g2133 14 26821087 26822407 Lele16g0224 16 1242274 1243583 hybridization