Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0056 ATGGCTTCCAAGGCAGGTACGGAGATAGTAAGTCCTCGCTTTCCGATGTTCTCCCTTGCTAGTTTCAAATCCTCTCTTAATTTTCTTGTGCACTTTTTTCCAGGAGGAAGTTCTGTTGATTTATGGTCAGATATTGTAGGTGCTGATGCACCGCAGCAGCAGCAGCAGCATCAACAAATTGAAGTGGTATACATAAGAAGAAAACCCCAGAACAACCAAAATGACTTGAACTTAAAGCATTCTGATGTTAGGAGCCCGCCTGCGAAGCGCGTGAGTTTGGTCGACCCAAACAAGCGAGTCAGTTGGAATAGATCTCTCTCGACCAGAGGGAGGACAAGTATAGCTGTTGGAGCTTGTATGGTTTATCAGCCTGAATTGAAGAAGGAAAAAGAAAAGGAAAACCTGCTCTTCCCAAACCACTTATTTGTTTGGTATTCACAGGGAAAATTTGTAGCACCTCCTAACTTTGAGAAGGAGAGAGCATACTTTGAAGAGGTTGATGATTTTGAGTTGTTAGAGGAGAGCCCCTCGCCCAAGAAAGTTGGCACATGGACCATAGGCAATGAAAATTATAATGGTCAAGTGCCTCATTTATGCTCAAGATTAGAAAAATGGTTACTCTCCAGGAAATTGAATCTTAGTTGTGGTCCTTCTAGCACGCTGTCTAAGATATTAGATACTCCAGCCAGGGGGTTGGGGACTATTTATGATGTTGATTTATGTTCCTTAGATCTGAGGTCTTCTGTAAAATCCGTGAAAGTCAATCCACATCTTCATACCATCATAACTGAAGGTTGCAGTACTCTACTTGATAATGGTCCATTTGAGGATGGCATCAATTTGCCAACTGATAAAATTTCCACTCAAGATGATGAAGATTCTGCAAATTTAGAAGCTGCTGTTAAGAAACTCTCAGTGACATCATCATCAGCTTTGGCAGATGAACATCTTAGTCCATTTGCTGCTTTATTAGAAATATGTGGACAGTCTGGGCCTTCGAAGTTTCAAGATGTGCTTTCTAATGATTCCGAGACTATTGTCAAAGTTGGTGAAGAAACATATCGAGAAGCTTTCAAGATTGGCAGCTACGTTTGTAAAATAGTTCCTATTGATGGGAACTTCAGAGTGAATGGAGAAGTTCAAAAGGTGACTATTTTGGTTGTTTTGGGTAAGAAGATGCTATCAGAAGAATTGTTGGAGGAGGTGGTTCTTTGGAAAACTCTTAACTATTTGAGGATAAATGATGGAGACGCTCATAATTCTTGTGGAATATTTATTGAAACAATAGAAATGATCACCCGAAAGTGTTTCCAGAAGAACAGGCTTCCCATTTTGACCATTTTTGATGTTATGATGGTTACGTTTCAACTTCTTTGTTATATGGTGTTTGTATTACAACACGGTGGCAAGGATCTTGAAAGCTTTGCACTTTTGAATTTTGATGAGGCAAGGAGTTTACTAATTCAGGTTACTGCTGGGCTTGCTGTGGCTGAATCTGCATATGAATTTGAACATCGAGATCTTCACTGGGGAAACATACTTTTAAGTCGAAGCGACTCTGAGACATTGCAGTTCACTCTTGATGGCAGGCATATGCTTGTTAAAACATATGGACTGATAATATCTATTATTGACTTTATTCTGTCACGAATAAACACAGGTGATGATGTACTCTTCTTGGATCTTTCCTCAGATCCCGATCTATTTAAGGGTCCTAAAGGGGACAAACAGGAGCGTACTTCAAAGAATGAGAGAGATCTGCGTTCCTTGAAGAAACGTCTGGACAAGTACAATTCAGCCAAGGAAGCAATTTCCGATTCTTTCTTCGATGACTTGTTGGTTGTGGATGGAACTCTTGTGGGATTTTCATATCGTGAAAGAGGGGACGCTGGGACCATATCTCATATTCGAATTTTTTTCACGGATCCTAGAACTTTGAGCACTCTCACCAACTCCCGCGAGTCGCTTGATTTCTATCTCAACGATGACCTCGTTAAATCTTTGATTAGCTCAAATCCATGGGCAGTTTCATGGCTGAAAACCAATCTTGTAGATCTTCTTCCAAAAACTGAAATCAATAGCATTATAGCTAGCTGTGGGAATTTAGCCCAAAATGAGGTACCATTACTGGTCTCTGCTCTGAAATCTATTCATTCAGTTCTCAGTAATCTTCATCTAGGCAGGGAAGTGAAGGTCTCAGTAGCATGTCCTCTGTCATTCTTAGAGAAGTGGAAAAATTCAAATGAGAATGAACTCCATAGGATTATGTCATTTATAAAGGAAACAAATTCCTTTGTCATGATAGACGACAGCATTGATGGGGAAATAAGCGTAGGGGACCGTTTTGTACATTCTGCTATAAAACGAGCTACTCATGCTGCTTCTATCCTTCCTTACAAAGATGTTCCCTTGGTTCTAACAATAAAAATCCCAGCAATTCCCAGTTCAATGAAACTAGCTCAATTCAGCCAAACACTACCAAAACATCTTGAAGCAACGAGCTCTAAGGTCAGTGGTAGAGTAATGGCATTTTATGCAGAAGTACATGCAATAGAAGCTTTTGAGCATGAACAGCTCAAAAGGGAAGAAGAGGAAGAGATTTTTCCCTTGTCCCGCAGAGAAATCCTAAGCAAATTCCACATCAGAAGAACTCTGGATGAAATTTACCCCACAAATCCAACTTCAGCTGCACCAGTAGTTACAACCCCAGATGCACCAACCATTATCACAGTTCCCTCCACAATTCCTGCTCCTCCCACCAATCCTGCTGCAATGCCTGTGACAGTTCCTACCACAACCTCTGTGCCATTACCTCCCACAAATCCGGCCAATACTGGGACAACCCCGATAACTGTTCCGGGCGCACAACCAGCAATATATTATCCACCCCCTACAGGAGGTGTTCCTGTGGTGAACTCCATTCCACCTCCTGCAAACAGCAATGCTCCGACCACAGCAGGGCAGAGTTGGTGTGTGGCCAAAACTGGAGCTGCAGAGACTGCTCTTCAATCAGCATTGGACTATGCTTGTGGAATGGGTGGTGTAGACTGTTCACAAATCCAGCAGAGTGGGAATTGTTACAATCCAAATGCTCTTGAAAACCATGCTTCTTATGCCTTCAACAGCTACTACCAGAAAAATCCAGCACCAACAAGCTGTGACTTTGGAGGGGCTGCCACCCTAGTTAACGTGAACCCAAGCTCGGGTTCTTGCATTTTTCCATCATCCTCTTCCTCTCTTTCATCGTCAACCCCAACAACAACGACATCATCATCATCTGGGACCGACATATCAGGCTATGGTACCCCACCTTCAGTGTTAAATTCAAGCAGCAGCTCAGCATCAAGCACAGGTACCTCACCATTTTACGGGTCCGAAAGTCCTACAGGTGCAAACACCGCGCCATCATCACATTCAGCCAGTTTGCAGCCTTTTCTAAGTTTCATTGTTCTGGTGGTATCATTAGTCACTGGAAAACTCATTCAGAAAGACAATAGAGTAAACTGCATTATAAAGGATCTGCTCTCTGAGGTGAAGGATAAAAGAATTTATGCTGTTGAAATAACTGCTAGTAACGGCTTTTAG 3585 0.4206 MASKAGTEIVSPRFPMFSLASFKSSLNFLVHFFPGGSSVDLWSDIVGADAPQQQQQHQQIEVVYIRRKPQNNQNDLNLKHSDVRSPPAKRVSLVDPNKRVSWNRSLSTRGRTSIAVGACMVYQPELKKEKEKENLLFPNHLFVWYSQGKFVAPPNFEKERAYFEEVDDFELLEESPSPKKVGTWTIGNENYNGQVPHLCSRLEKWLLSRKLNLSCGPSSTLSKILDTPARGLGTIYDVDLCSLDLRSSVKSVKVNPHLHTIITEGCSTLLDNGPFEDGINLPTDKISTQDDEDSANLEAAVKKLSVTSSSALADEHLSPFAALLEICGQSGPSKFQDVLSNDSETIVKVGEETYREAFKIGSYVCKIVPIDGNFRVNGEVQKVTILVVLGKKMLSEELLEEVVLWKTLNYLRINDGDAHNSCGIFIETIEMITRKCFQKNRLPILTIFDVMMVTFQLLCYMVFVLQHGGKDLESFALLNFDEARSLLIQVTAGLAVAESAYEFEHRDLHWGNILLSRSDSETLQFTLDGRHMLVKTYGLIISIIDFILSRINTGDDVLFLDLSSDPDLFKGPKGDKQERTSKNERDLRSLKKRLDKYNSAKEAISDSFFDDLLVVDGTLVGFSYRERGDAGTISHIRIFFTDPRTLSTLTNSRESLDFYLNDDLVKSLISSNPWAVSWLKTNLVDLLPKTEINSIIASCGNLAQNEVPLLVSALKSIHSVLSNLHLGREVKVSVACPLSFLEKWKNSNENELHRIMSFIKETNSFVMIDDSIDGEISVGDRFVHSAIKRATHAASILPYKDVPLVLTIKIPAIPSSMKLAQFSQTLPKHLEATSSKVSGRVMAFYAEVHAIEAFEHEQLKREEEEEIFPLSRREILSKFHIRRTLDEIYPTNPTSAAPVVTTPDAPTIITVPSTIPAPPTNPAAMPVTVPTTTSVPLPPTNPANTGTTPITVPGAQPAIYYPPPTGGVPVVNSIPPPANSNAPTTAGQSWCVAKTGAAETALQSALDYACGMGGVDCSQIQQSGNCYNPNALENHASYAFNSYYQKNPAPTSCDFGGAATLVNVNPSSGSCIFPSSSSSLSSSTPTTTTSSSSGTDISGYGTPPSVLNSSSSSASSTGTSPFYGSESPTGANTAPSSHSASLQPFLSFIVLVVSLVTGKLIQKDNRVNCIIKDLLSEVKDKRIYAVEITASNGF 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0056 1194 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 285 577 - -
Lele08g0056 1194 Pfam X8 domain 990 1060 IPR012946 -
Lele08g0056 1194 MobiDBLite consensus disorder prediction 1075 1136 - -
Lele08g0056 1194 FunFam Glucan endo-1,3-beta-glucosidase 4 984 1077 - -
Lele08g0056 1194 Gene3D Phosphorylase Kinase; domain 1 332 435 - -
Lele08g0056 1194 Gene3D Transferase(Phosphotransferase) domain 1 468 684 - -
Lele08g0056 1194 SUPERFAMILY Protein kinase-like (PK-like) 466 552 IPR011009 -
Lele08g0056 1194 Coils Coil 587 607 - -
Lele08g0056 1194 Gene3D - 984 1091 - -
Lele08g0056 1194 Pfam Haspin like kinase domain 313 572 - -
Lele08g0056 1194 SMART X8_cls 989 1073 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0056 Lele-ChrLele08 347374 356600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0056 633 769 Glycoside Hydrolase AT2G05790 28.667 2.64e-10 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2205 13 28476378 28477606 Lele08g0056 08 347374 356600 CCT
Lele14g2142 14 26864015 26865245 Lele08g0056 08 347374 356600 CCT
Lele15g0209 15 1201651 1202879 Lele08g0056 08 347374 356600 CCT
Lele16g0216 16 1205154 1206387 Lele08g0056 08 347374 356600 CCT
Lele08g0056 08 347374 356600 Lele08g0056 08 347374 356600 ECH
Lele05g0241 05 1346686 1349052 Lele08g0056 08 347374 356600 hybridization
Lele06g0056 06 373336 382632 Lele08g0056 08 347374 356600 hybridization