Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0253 ATGCCCAACCATTCTACTTTATGCTTCTTTCTTTATCTCTTCCTCGTCTGCTGCTCGGGAATTCTTGTGGGATTTTCATACCGTGAAAGAGGAGATGCTGGGACCATATTGTTCCTCAAACAAAAAGTGCCAGTATCTCATATTCGAATTTTTGTCACGGATCCTAGAACTTTGAGCAATCTCACCAACTCGCACGAGTCGCTTGATTTCTACCTCAATGAAAACCTCATAAAAGCTTTGAGTAGCTCAAATCCATCTGCAGTTTCATGGCTGAAAACCAATCTTGTAGATCTTCTTCCAAAAACTGAAATCAATAGCATTATAGCTAGTTGTGGGAATTTAGGCCAAAATGAGGTACCATTACTGGTTTCTGCTCTGAGAGCTATTCACTCAGTTCTCAGTAAGCTTCATTTAGGCAGGGAAGTGAAGGTCTCAGTAGCATTTCCTCTGTCATTCTTAGAGAAGTGGAAAAATTCAAATGAGAATGACCTCCATAGGATTCTGTCATTTATAAAGGAAACAAATTCCTTCGTCATGATAGAAGACAGCATTGATGGGGAACGCCTTGTCCAGTCTGCTATAGAACGATCTTCTCATGCTGCTTCTATCATTCCTCACGAAGATGTTCCCTTGGTTCTAACAGTAAAAATCCCAGCAATTCCCAGTTCAATGGAACTAGCTCAATTCCGCCAAACACTATCCAAACATCTTGAAGCAACAAGCTCTATGGTCAGTGGTAGAGTAATGGCATTTTATGCAGAAGTACATGCAATAGAAGCTTTTGAGCATGAACATCTCAAAAGGGAAGAAGAGGAAGAGACCTTTCCTTTGTCCCGCAGAGAAATCCTAAGCAAATTCCACATAAGAAGAACTCTAGATGAAATTTACCCCACAAATCCAACTTCAGCTACACCAGTAGTTACAACCCCAGATGCACCAACCATTATCACAGTTCCCTCAACCATTCCTGCTCCTCCCACCAATCCTGCTGCAATGCCTGCAGTGACAGTTCCTACCGCAACCTCTGTGCCATTACCTCCCACGAATCCGGCCAATCCCGGGACAACCCCGATAACAGTTCCGGGGACACAACCGGCAACATATTATCCACCCCCATCAGGAGGTGTTCCTGTAGTGAGCTCCATTCCACCTCCTGCAAAAAGTAATGCTCCGGCCACAGGAGGACAGAGTTGGTGTGTGGCCAAGACTGGAGCTGCAGAAACTGCTCTTCAATCAGCATTGGACTATGCTTGTGGAATGGGTGGTGCAGATTGTTCACAAATCCAGCAGAGTGGGAATTGTTACAATCCAAATACTCTTGAAAACCATGCTTCTTATGCCTTCAACAGCTACTACCAGAAAAATCCAGCACCAACAAGCTGTGACTTTGGAGGGGCTGCCACCCTAGTTAACGTGAATCCAAGCTCAGGTTCTTGCATTTTTCCATCATCCTCTACCTCTCTTTCATCGTCAATCCCAACAACAACGACATCATCAACTCCCACCCCCACTCCAACTACACCATCATCATCAGGGACAGACATATCAGGCAGCAGCTCAGCATCAAGCACAGGTACCTCACCATTTTACGGGTACGAAACTCCTACGGGTGCAAACACCACGTCATCATCCCATTCCACCAGTGTGCAGCCTTTTCTAAGGTTCACTGTTCTGGTGATATCATTGGTCACTGGAAAACTCAGCATGTGCCCATAG 1716 0.4493 MPNHSTLCFFLYLFLVCCSGILVGFSYRERGDAGTILFLKQKVPVSHIRIFVTDPRTLSNLTNSHESLDFYLNENLIKALSSSNPSAVSWLKTNLVDLLPKTEINSIIASCGNLGQNEVPLLVSALRAIHSVLSKLHLGREVKVSVAFPLSFLEKWKNSNENDLHRILSFIKETNSFVMIEDSIDGERLVQSAIERSSHAASIIPHEDVPLVLTVKIPAIPSSMELAQFRQTLSKHLEATSSMVSGRVMAFYAEVHAIEAFEHEHLKREEEEETFPLSRREILSKFHIRRTLDEIYPTNPTSATPVVTTPDAPTIITVPSTIPAPPTNPAAMPAVTVPTATSVPLPPTNPANPGTTPITVPGTQPATYYPPPSGGVPVVSSIPPPAKSNAPATGGQSWCVAKTGAAETALQSALDYACGMGGADCSQIQQSGNCYNPNTLENHASYAFNSYYQKNPAPTSCDFGGAATLVNVNPSSGSCIFPSSSTSLSSSIPTTTTSSTPTPTPTTPSSSGTDISGSSSASSTGTSPFYGYETPTGANTTSSSHSTSVQPFLRFTVLVISLVTGKLSMCP 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0253 571 FunFam Glucan endo-1,3-beta-glucosidase 4 392 485 - -
Lele07g0253 571 MobiDBLite consensus disorder prediction 483 546 - -
Lele07g0253 571 SMART X8_cls 397 481 IPR012946 -
Lele07g0253 571 Pfam X8 domain 398 468 IPR012946 -
Lele07g0253 571 PANTHER BETA-1,3 GLUCANASE 332 497 IPR044788 -
Lele07g0253 571 Gene3D - 393 498 - -
Lele07g0253 571 Gene3D Glycosidases 23 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0253 Lele-ChrLele07 1381216 1383585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0253 23 484 Glycoside Hydrolase AT2G05790 28.221 4.71e-37 141
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2205 13 28476378 28477606 Lele07g0253 07 1381216 1383585 CCT
Lele14g2142 14 26864015 26865245 Lele07g0253 07 1381216 1383585 CCT
Lele15g0209 15 1201651 1202879 Lele07g0253 07 1381216 1383585 CCT
Lele16g0216 16 1205154 1206387 Lele07g0253 07 1381216 1383585 CCT
Lele07g0253 07 1381216 1383585 Lele07g0253 07 1381216 1383585 ECH
Lele05g0241 05 1346686 1349052 Lele07g0253 07 1381216 1383585 hybridization
Lele06g0056 06 373336 382632 Lele07g0253 07 1381216 1383585 hybridization