Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0655 ATGATAGTGCAAAAAACGAGACATTATACAAGCAAGTGTGATTCAGAAGGATACAAAAAATACAACTGTATTGTAATCAGTCTCTTCCACACAATCAGATTTTCCTGCAACTTGCACCTCACCAATTCTGCCTTTAAAACCCCTCCACCTCCCCATTGTCCTTCCCATTCACTTCACTTCTCTCAACTCTCATCCACCATGGCTGCTTCCACCAAGCTCTCTGTCACCATCCTGGTGCTCTTCCTCGTTGCTTCCTCAACCTTCACGCAAGCCTGCCGGTCATGCAAGCCTCCCAAGCCCAAGCCCAAGCCATGCCCGACTCCGGCGCCGGCTAAGTGCCCCCTGGACACACTGAAGCTAGGAGTGTGTGCTGACGTGCTGGGCCTTGTAAACGTCGTCGTCGGGTCTCCTCCTACCAGCAAGTGTTGCCCATTGCTGGAAGGTTTGGTAGACTTAGAGGCAGCTCTCTGTCTCTGCACTGCCATTAAGGCCAACGTGCTTGGCATCAACTTGAACGTACCCCTCAGCCTCAGCTTGATCCTTAGCTCTTGTCAAAAATCTGTTCCTCCTGGTTTTCAATGTCCCTAG 588 0.5085 MIVQKTRHYTSKCDSEGYKKYNCIVISLFHTIRFSCNLHLTNSAFKTPPPPHCPSHSLHFSQLSSTMAASTKLSVTILVLFLVASSTFTQACRSCKPPKPKPKPCPTPAPAKCPLDTLKLGVCADVLGLVNVVVGSPPTSKCCPLLEGLVDLEAALCLCTAIKANVLGINLNVPLSLSLILSSCQKSVPPGFQCP 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0655 195 Pfam Hydrophobic seed protein 113 195 IPR027923 -
Lele04g0655 195 PANTHER - 73 194 - -
Lele04g0655 195 CDD HPS_like 112 194 IPR027923 -
Lele04g0655 195 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 116 195 IPR036312 -
Lele04g0655 195 SMART aai_6 113 194 IPR016140 -
Lele04g0655 195 Gene3D - 111 195 IPR036312 -
Lele04g0655 195 FunFam pEARLI1-like lipid transfer protein 1 111 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0655 Lele-ChrLele04 3944359 3944946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0655 104 195 Acyl Lipid Metabolism Gene Families AT4G22490 40.217 3.99e-16 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0637 25 4028780 4030682 Lele04g0655 04 3944359 3944946 CCT
Lele26g0653 26 4146844 4147266 Lele04g0655 04 3944359 3944946 CCT
Lele27g1446 27 20657862 20658122 Lele04g0655 04 3944359 3944946 CCT
Lele04g0655 04 3944359 3944946 Lele25g0627 25 3954023 3956611 CCT
Lele04g0655 04 3944359 3944946 Lele26g0638 26 4051357 4053895 CCT
Lele04g0655 04 3944359 3944946 Lele27g1460 27 20727145 20729713 CCT
Lele04g0655 04 3944359 3944946 Lele28g0622 28 3966456 3970542 CCT
Lele04g0655 04 3944359 3944946 Lele04g0655 04 3944359 3944946 ECH
Lele01g0649 01 3794181 3794765 Lele04g0655 04 3944359 3944946 hybridization
Lele02g0635 02 3798330 3798911 Lele04g0655 04 3944359 3944946 hybridization