Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0635 ATGCCAGTGCCAAAAAAGAGACATTATACAAGCAAGTGTGATTCAGAAGGATACAAAAAATACAACTGTATTGTTATCAGTCTCTTCCACACAATCAGATTTTCCTGCAACTTGCACCTCACCAATTCTGCCTTTAAAACCCCTCCACCTCCCCACGGTCCTTCCCATTCACTTCACTTCTCTCCACTCTCATCCACCATGGCTGCTTCCACCAAGCTCTCTTTCACCATTCTGGTGCTCTTCCTCCTTGCTTCCTCAACCTTCACGGAAGCCTGCGGGTCATGCAAGCCTCCCAAGCCCAAGCCATGCCCGACTCCGGCGCCGGCTAAGTGCCCCCTGGACACACTGAAGCTAGGAGTGTGTGCTGACGTGCTGGGCCTTGTAAACGTCGTCGTCGGGTCTCCTCCTACCAGCAAGTGTTGCCCATTGCTGGCAGGTTTGGTAGATTTAGAGGCAGCTCTCTGTCTCTGCACTGCCATTAAGGCCAACGTGCTTGGCATCAACTTGAACGTACCTCTCAGCCTCAGCTTGATCCTTAGCTCTTGTCAAAAATCTGTTCCTCCTGGTTTTCAATGTCCCTAG 582 0.5103 MPVPKKRHYTSKCDSEGYKKYNCIVISLFHTIRFSCNLHLTNSAFKTPPPPHGPSHSLHFSPLSSTMAASTKLSFTILVLFLLASSTFTEACGSCKPPKPKPCPTPAPAKCPLDTLKLGVCADVLGLVNVVVGSPPTSKCCPLLAGLVDLEAALCLCTAIKANVLGINLNVPLSLSLILSSCQKSVPPGFQCP 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0635 193 Pfam Hydrophobic seed protein 111 193 IPR027923 -
Lele02g0635 193 FunFam pEARLI1-like lipid transfer protein 1 109 193 - -
Lele02g0635 193 Gene3D - 109 193 IPR036312 -
Lele02g0635 193 CDD HPS_like 110 192 IPR027923 -
Lele02g0635 193 PANTHER - 70 192 - -
Lele02g0635 193 SMART aai_6 111 192 IPR016140 -
Lele02g0635 193 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 114 193 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0635 Lele-ChrLele02 3798330 3798911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0635 102 193 Acyl Lipid Metabolism Gene Families AT4G22490 40.217 7.20e-16 68.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0637 25 4028780 4030682 Lele02g0635 02 3798330 3798911 CCT
Lele26g0653 26 4146844 4147266 Lele02g0635 02 3798330 3798911 CCT
Lele27g1446 27 20657862 20658122 Lele02g0635 02 3798330 3798911 CCT
Lele02g0635 02 3798330 3798911 Lele25g0627 25 3954023 3956611 CCT
Lele02g0635 02 3798330 3798911 Lele26g0638 26 4051357 4053895 CCT
Lele02g0635 02 3798330 3798911 Lele27g1460 27 20727145 20729713 CCT
Lele02g0635 02 3798330 3798911 Lele28g0622 28 3966456 3970542 CCT
Lele02g0635 02 3798330 3798911 Lele02g0635 02 3798330 3798911 ECH
Lele02g0635 02 3798330 3798911 Lele03g0648 03 3801987 3805025 hybridization
Lele02g0635 02 3798330 3798911 Lele04g0655 04 3944359 3944946 hybridization