Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0649 ATGACAGTGCAAAAACGAGACATTATACAAGTAAGTGTGATTCAGAAGCATACAAAGAATACAAGTATGATTATCAGTCTCTTCCACGTAATCAGATTTTCCTGCAACTTGCACCTCACCATTCTGCCTTTAAAACCCCTCCTTCGCCCCACTGTCCTTCCCATTCACTTCTCTTCTCTTCACTCCGCCATGGCTGCTTCCACCAAGCTCTCTGCCTCTGCCACCTTTCTGGTGCTCTTTCTTCTCGCTACCTCGACCTTCACGGAAGCCTGCGGGTCATGCAAGCCTCCCAAGCCCAAGCCCAAGCCCTGCCCGACTCCGGCGCCGGCTAAGTGCCCACTAGACACACTGAAGCTAGGAGCATGCGCCGACGTGCTGGGCCTTGTAAACGTCGTCGTCGGGTCTCATCCTACCAGTAAGTGTTGCCCATTGCTGGAGGGTTTGGCAGATTTAGAGGCAGCTCTCTGCCTCTGCACTGCCATTAACGCTAACGTGCTTGGCATCAACTTGAACGTACCTCTCAGCCTCAGCTTGATCCTTAGCTCCTGTCAAAAATCTGTTCCTCCTGGCTTTCAATGTCCCTAG 585 0.5197 MTVQKRDIIQVSVIQKHTKNTSMIISLFHVIRFSCNLHLTILPLKPLLRPTVLPIHFSSLHSAMAASTKLSASATFLVLFLLATSTFTEACGSCKPPKPKPKPCPTPAPAKCPLDTLKLGACADVLGLVNVVVGSHPTSKCCPLLEGLADLEAALCLCTAINANVLGINLNVPLSLSLILSSCQKSVPPGFQCP 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0649 194 CDD HPS_like 111 193 IPR027923 -
Lele01g0649 194 PANTHER - 74 193 - -
Lele01g0649 194 FunFam pEARLI1-like lipid transfer protein 1 110 194 - -
Lele01g0649 194 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 115 194 IPR036312 -
Lele01g0649 194 SMART aai_6 112 193 IPR016140 -
Lele01g0649 194 Gene3D - 110 194 IPR036312 -
Lele01g0649 194 Pfam Hydrophobic seed protein 112 194 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0649 Lele-ChrLele01 3794181 3794765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0649 103 194 Acyl Lipid Metabolism Gene Families AT4G22490 38.043 8.29e-14 63.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0637 25 4028780 4030682 Lele01g0649 01 3794181 3794765 CCT
Lele26g0653 26 4146844 4147266 Lele01g0649 01 3794181 3794765 CCT
Lele27g1446 27 20657862 20658122 Lele01g0649 01 3794181 3794765 CCT
Lele01g0649 01 3794181 3794765 Lele25g0627 25 3954023 3956611 CCT
Lele01g0649 01 3794181 3794765 Lele26g0638 26 4051357 4053895 CCT
Lele01g0649 01 3794181 3794765 Lele27g1460 27 20727145 20729713 CCT
Lele01g0649 01 3794181 3794765 Lele28g0622 28 3966456 3970542 CCT
Lele01g0649 01 3794181 3794765 Lele01g0649 01 3794181 3794765 ECH
Lele01g0649 01 3794181 3794765 Lele03g0648 03 3801987 3805025 hybridization
Lele01g0649 01 3794181 3794765 Lele04g0655 04 3944359 3944946 hybridization