Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0653 ATGGCTTCGCACAAGCTCTTTGCTATCATTTTCGTTCTCTCTCTCCTTGCTCACTCAACATTCACCGTTGCCCACAACAAACCAAAACCATGCCCGCCACCTACCCCAAAGCCCACCCCTCCCACCCCGAAGCCGAGTCCTACACCGCCGACACCGGCGACGATGGACAAATGCCCTAAGGATACGCTGAAGCTGGCGTTGTGTGCGGATGTTCTGGGACTGGTTCATGTTGTTGTCGGAACTCCATTGTCGGAGAAGTGTTGTGCATTGTTGGATGGATTGGTGGATTTGGAGGCGGCACTTTGTCTGTGCACAGCGATTAAGGCCAACTTGCTTGGAATAAACTTGAATGTCCCAGTCACTCTCAGCTTAATCCTTAGTGCTTGTCAGAAAACAGTTCCTCCTGGTTTCCAATGTCCTTAG 423 0.513 MASHKLFAIIFVLSLLAHSTFTVAHNKPKPCPPPTPKPTPPTPKPSPTPPTPATMDKCPKDTLKLALCADVLGLVHVVVGTPLSEKCCALLDGLVDLEAALCLCTAIKANLLGINLNVPVTLSLILSACQKTVPPGFQCP 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0653 140 FunFam pEARLI1-like lipid transfer protein 1 56 140 - -
Lele26g0653 140 Gene3D - 56 140 IPR036312 -
Lele26g0653 140 MobiDBLite consensus disorder prediction 27 54 - -
Lele26g0653 140 SMART aai_6 58 139 IPR016140 -
Lele26g0653 140 MobiDBLite consensus disorder prediction 26 55 - -
Lele26g0653 140 Pfam Hydrophobic seed protein 58 140 IPR027923 -
Lele26g0653 140 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 61 140 IPR036312 -
Lele26g0653 140 PANTHER - 7 139 - -
Lele26g0653 140 CDD HPS_like 56 139 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0653 Lele-ChrLele26 4146844 4147266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0653 46 140 Acyl Lipid Metabolism Gene Families AT4G22490 36.842 5.23e-17 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0653 26 4146844 4147266 Lele01g0649 01 3794181 3794765 CCT
Lele26g0653 26 4146844 4147266 Lele02g0635 02 3798330 3798911 CCT
Lele26g0653 26 4146844 4147266 Lele03g0648 03 3801987 3805025 CCT
Lele26g0653 26 4146844 4147266 Lele04g0655 04 3944359 3944946 CCT
Lele26g0653 26 4146844 4147266 Lele27g1446 27 20657862 20658122 hybridization
Lele26g0653 26 4146844 4147266 Lele28g0635 28 4053391 4053804 hybridization