Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0637 ATGGCTCCCCACAAGCTCTTTGCTATCATTTTCGTTCTCTCTCTCCTCGCTCACTCAACATTCACCACTGCCCATAACAAACCCAAACCATGTCCACCGCCGGCGACCCCGACGCCGAGCCCTACACCGCCCACTCCGACGACCCCTAAGCCGAGCCCTACACCGCCGACTCCGGCGACGAAGGACAAATGCCCGAAAGATACGCTGAAGCTGGCGTTGTGTGCCGATGTTCTGGGACTGGTTCATGTTGTTGTCGGAACTCCGTTGTCGGAGAAGTGTTGTGCATTGTTGGATGGATTGGTGGACTTGGAGGCAGCACTTTGTCTGTGCACAGCGATTAAGGCCAACTTGCTTGGAATCAACTTGAATGTTCCAGTCACTCTCAGCTTAATCCTTAGTGCTTGCCAGAAAACAGTGCCTCCTGGTTTCCAATCGCTTTTTCATTACGGTTGAGTAATAGAATTGCTTGTGGGGGGCTGGAGAGTAATTCTTCCTTTTTTATTCACGATATGCCTGGCTCTTCATGTGATCTCTGTTCGTTTTCGTTTCGAAACGGAGATTAAGATTGTTAGAAACACGTCATGCATTTGA 591 0.5008 MAPHKLFAIIFVLSLLAHSTFTTAHNKPKPCPPPATPTPSPTPPTPTTPKPSPTPPTPATKDKCPKDTLKLALCADVLGLVHVVVGTPLSEKCCALLDGLVDLEAALCLCTAIKANLLGINLNVPVTLSLILSACQKTVPPGFQSLFHYGXVIELLVGGWRVILPFLFTICLALHVISVRFRFETEIKIVRNTSCI 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0637 196 MobiDBLite consensus disorder prediction 26 63 - -
Lele25g0637 196 FunFam pEARLI1-like lipid transfer protein 1 62 146 - -
Lele25g0637 196 MobiDBLite consensus disorder prediction 27 60 - -
Lele25g0637 196 Gene3D - 62 146 IPR036312 -
Lele25g0637 196 SMART aai_6 64 143 IPR016140 -
Lele25g0637 196 Pfam Hydrophobic seed protein 64 144 IPR027923 -
Lele25g0637 196 CDD HPS_like 62 144 IPR027923 -
Lele25g0637 196 PANTHER - 7 144 - -
Lele25g0637 196 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 67 144 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0637 Lele-ChrLele25 4028780 4030682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele25g0637 54 144 Acyl Lipid Metabolism Gene Families AT4G22490 34.783 5.62e-14 63.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0637 25 4028780 4030682 Lele01g0649 01 3794181 3794765 CCT
Lele25g0637 25 4028780 4030682 Lele02g0635 02 3798330 3798911 CCT
Lele25g0637 25 4028780 4030682 Lele03g0648 03 3801987 3805025 CCT
Lele25g0637 25 4028780 4030682 Lele04g0655 04 3944359 3944946 CCT
Lele25g0637 25 4028780 4030682 Lele27g1446 27 20657862 20658122 hybridization
Lele25g0637 25 4028780 4030682 Lele28g0635 28 4053391 4053804 hybridization