Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0648 ATGTGTAGGGCTTCCAACCACGTAGGGGCGAGCTTCCCAGGTAAGGGAGAGGGAGAGAGGTCACGAGTAGGGCAAAGCCATGACAGTGCAAAAAACGAGACATTATACAAGTGTGATTCAGAAGCATACAAAAAATACAAGTATGGTTATCAGTCTCTTCCACATAATCAGATTTTCCTGCAACTTGCACCTCACCATTCTGCCTTTAAAACCCCGCCTTCTCCCCACTGTCCTTCCCATTCACTCTCCGCCATGGCTGCTTCCACCAAGCTCTCTGCCACTGCCACCATTCTGGCGCTCTTTCTCCTCGCTTCCTCGACCTTCACGGAAGCCTGCGGGTCATGCAAGCCTCCTAAGCCCAAGCCCAAGCCCTGCCCGACTCCGGCGCCGGCTAAGTGCCCACTAGACACACTGAAGCTAGGAGTATGCGCCGACGTGCTGGGCGTTGTAAACGTCGTCGCTGGGTCTCCTCCTACCAGTAAGTGTTGCCCATTGCTGGAGGGTTTGGCAGATTTAGAGGCAGCTCTCTGTCTCTGCACTGCCATTAACGCTAACGTGCTTGGCATCAACTTGAACGTACCTCTCAGCCTCAGCTTGATCCTTAGCTCCTGTCAAAAATCTGTTCCTCCTGGTTTCCAATGTCCCTAG 648 0.5309 MCRASNHVGASFPGKGEGERSRVGQSHDSAKNETLYKCDSEAYKKYKYGYQSLPHNQIFLQLAPHHSAFKTPPSPHCPSHSLSAMAASTKLSATATILALFLLASSTFTEACGSCKPPKPKPKPCPTPAPAKCPLDTLKLGVCADVLGVVNVVAGSPPTSKCCPLLEGLADLEAALCLCTAINANVLGINLNVPLSLSLILSSCQKSVPPGFQCP 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0648 215 MobiDBLite consensus disorder prediction 1 30 - -
Lele03g0648 215 Pfam Hydrophobic seed protein 133 215 IPR027923 -
Lele03g0648 215 PANTHER - 97 214 - -
Lele03g0648 215 FunFam pEARLI1-like lipid transfer protein 1 131 215 - -
Lele03g0648 215 SMART aai_6 133 214 IPR016140 -
Lele03g0648 215 Gene3D - 131 215 IPR036312 -
Lele03g0648 215 CDD HPS_like 132 214 IPR027923 -
Lele03g0648 215 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 136 215 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0648 Lele-ChrLele03 3801987 3805025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0648 124 215 Acyl Lipid Metabolism Gene Families AT4G22490 40.217 1.02e-15 68.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g0637 25 4028780 4030682 Lele03g0648 03 3801987 3805025 CCT
Lele26g0653 26 4146844 4147266 Lele03g0648 03 3801987 3805025 CCT
Lele27g1446 27 20657862 20658122 Lele03g0648 03 3801987 3805025 CCT
Lele03g0648 03 3801987 3805025 Lele25g0627 25 3954023 3956611 CCT
Lele03g0648 03 3801987 3805025 Lele26g0638 26 4051357 4053895 CCT
Lele03g0648 03 3801987 3805025 Lele27g1460 27 20727145 20729713 CCT
Lele03g0648 03 3801987 3805025 Lele28g0622 28 3966456 3970542 CCT
Lele03g0648 03 3801987 3805025 Lele03g0648 03 3801987 3805025 ECH
Lele01g0649 01 3794181 3794765 Lele03g0648 03 3801987 3805025 hybridization
Lele02g0635 02 3798330 3798911 Lele03g0648 03 3801987 3805025 hybridization