Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0972 ATGGCCTCAACTTCGCAAAAAACGACGTCTCCTTCTTGCTATACCCCCGCCAATTCCCCTCCCGTTTCACCACCCGCAGCGCCGTCCGTTGGAGCTGCCAATGCCGTCGGCGAGTGGACGCATCGCGCTGATGATCACCTAGTCAACAAGGTACCCGTGACGACTTTGATCAACCCTGTTGATTCGCTCCCAGAACCTTCCACTAATGCTACTGCCACCAAAGGAATCAATTTAATGCCAAGGGCACATTCAAGCCACCCTCTAGATCCTTTATCCGCTGCTGAGATCGCCGTGGCAGTGGCTGCTGTCAGAGCAGCTGGAGCCACAGCTGAGGTCAGAGATGCTATGCGCTTCTCTGAAGTTGTTCTACTGGAACCAGACAAGCATGTTGTTGCGCTAGCAGATGCATATTTCTTCCCTCCTTTTCAACCGTCATTACTTCCTAAGATTAAAGGGGGGCCTAATTTTCCGATTAAGCTGCCTCCCAGACGTGCTAAACTCGTCGTTTACAATAAGAATTCAAACCAGACTAGTGTGTGGATTGTTGAACTATCAGTACACGCAGTCACTCGAGGTGGTCACCACCGGGGGAAAGTAATTTCATCAGAGGTTATTCCAGATGTTCAGCCTGCAATGGATGCTGAGGAGTATGCAGAATGTGAAGCTGCCGTTAAAGACTTCCCACCATTTAGAGAGGCTATGAAGAGAAGGGGCATTGAAGACATGGACCTTGTAATGGTTGATCCCTGGTGTGCTGGTTATCATAGCCCAGATGATGCTCCCAGCCGAAGACTGGCTAAACCACTTATATTTTGTCGTAATGTGAGTGATTGCCCAATGGAAAATGGCTATGCACGTCCAGTTGAGGGCATCTTTGTGCGTGTTGATATGCAGAAGATGGAGGTGATTGAATTTGAAGACCGTAAACTTGTTCCTCTGCCTCCAGTTGATCCCTTGAGGAACTATACTGCTGGTGAAACAAGAGGTGGCTCTGATAGAGGTGATGTAAAACCCTTACAGATTATTCAGCCTGAAGGTCCAAGCTTTCGAGTCAATGGTCGCTATGTAGAATGGCAGAAGTGGAATTTTCGAATTGGATTTACTCCCAGAGAAGGCTTGGTTATACATTCTGTCGCTTACGTTGATGGTAGTCGAGGGAGAAGGCCTGTTGCACATAGGTTTAGTTTTGTGGAGATGGTTGTGCCGTATGGAGATCCAAATGATCCCCATTACAGAAAAAATGCTTTTGATGCTGGCGAAGATGGCTTGGGAAAAAATGCCCATTCTCTCAAGAAGGATTGTGATTGTTTGGGGGTCATTAAATATTTTGATGCTCACTTCACAAATTTTACTGGAGGAGTTGAGACAATTGAAAATTGTGTTTGTTTGCATGAAGAGGATTATGGAATCCTATGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGTCCGAAGGTCAAGAAGACTTACGGTTTCTTTTATATGTACAGTGGCCAACTACGAGTATGGATTTTTCTGGCACTTTTATCAGGATGGAAAAATTGAAGCTGAGGTCAAGCTAACTGGAATCCTCAGCTTAGGAGCGTTGATACCTGGAGAGTCTAGAAAATATGGTACCACGATTGCACCAGGCTTGTATGCTCCCGTCCACCAACACTTCTTTGTTGCTCGCATGGACATGGCTGTTGATTCTAAACCTGGTGAAGCTTTGAATCAGGTTGTGGAGGTCAATGTCAGAGTTGAGAAGCCTGGGGATGATAATGTTCACAATAATGCATTCTATGCGGAAGAGACTCTGCTCAGATCTGAATCGGGAGCCATGAGGGATTGCAATCCTTTGACCACTCGACACTGGATTGTGAGGAATACCAGAACAGGAAATAGAACGGGGCAACTAACAGGATACAAGCTAGTACCTGGTTCAAACTGCTTACCATTAGCAGGTTCAGAGGCCATGTTCTTAAGAAGAGCTGCATTCTTGAAGCATAATCTTTGGGTAACGCCATATTCACGCGAGGAGATGTTCCCAGGAGGGGAATTCCCTAATCAAAACCCTCGTATAGGTGACGGACTAGCTTCGTGGGTGAAGCAGAATCGATCATTGGAAGAAGCAGATATAGTTCTATGGTACGTATTTGGAATCACTCATGTGCCTCGTTTAGAAGACTGGCCTGTTATGCCAGTAGAGCGCATTGGTTTTATGCTCATGCCTCATGGATTCTTCAATTGCTCGCCTGCAGTAGATGTGCCCCCTAATGCATGTGAGATGGAGAATAAGGAGAATGAGAGCAAAGGCGGCAAGCATATCCAGAGAGGATTAGCGTCTAAGCTTTAG 2337 0.463 MASTSQKTTSPSCYTPANSPPVSPPAAPSVGAANAVGEWTHRADDHLVNKVPVTTLINPVDSLPEPSTNATATKGINLMPRAHSSHPLDPLSAAEIAVAVAAVRAAGATAEVRDAMRFSEVVLLEPDKHVVALADAYFFPPFQPSLLPKIKGGPNFPIKLPPRRAKLVVYNKNSNQTSVWIVELSVHAVTRGGHHRGKVISSEVIPDVQPAMDAEEYAECEAAVKDFPPFREAMKRRGIEDMDLVMVDPWCAGYHSPDDAPSRRLAKPLIFCRNVSDCPMENGYARPVEGIFVRVDMQKMEVIEFEDRKLVPLPPVDPLRNYTAGETRGGSDRGDVKPLQIIQPEGPSFRVNGRYVEWQKWNFRIGFTPREGLVIHSVAYVDGSRGRRPVAHRFSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKDCDCLGVIKYFDAHFTNFTGGVETIENCVCLHEEDYGILWKHQDWRTGLAEVRRSRRLTVSFICTVANYEYGFFWHFYQDGKIEAEVKLTGILSLGALIPGESRKYGTTIAPGLYAPVHQHFFVARMDMAVDSKPGEALNQVVEVNVRVEKPGDDNVHNNAFYAEETLLRSESGAMRDCNPLTTRHWIVRNTRTGNRTGQLTGYKLVPGSNCLPLAGSEAMFLRRAAFLKHNLWVTPYSREEMFPGGEFPNQNPRIGDGLASWVKQNRSLEEADIVLWYVFGITHVPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPPNACEMENKENESKGGKHIQRGLASKL 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0972 778 MobiDBLite consensus disorder prediction 758 778 - -
Lele20g0972 778 Gene3D - 214 317 - -
Lele20g0972 778 SUPERFAMILY Amine oxidase N-terminal region 209 326 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lele20g0972 778 PANTHER COPPER AMINE OXIDASE 81 763 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lele20g0972 778 Pfam Copper amine oxidase, enzyme domain 339 747 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lele20g0972 778 FunFam Amine oxidase 70 212 - -
Lele20g0972 778 FunFam Amine oxidase 215 318 - -
Lele20g0972 778 Pfam Copper amine oxidase, N2 domain 86 190 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lele20g0972 778 SUPERFAMILY Amine oxidase catalytic domain 333 752 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lele20g0972 778 MobiDBLite consensus disorder prediction 1 16 - -
Lele20g0972 778 FunFam Amine oxidase 329 754 - -
Lele20g0972 778 Gene3D - 69 212 - -
Lele20g0972 778 Pfam Copper amine oxidase, N3 domain 210 313 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lele20g0972 778 Gene3D Copper amine oxidase, catalytic domain 326 752 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lele20g0972 778 SUPERFAMILY Amine oxidase N-terminal region 83 186 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lele20g0972 778 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0972 Lele-ChrLele20 15797508 15802300 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1757 21 25331341 25335755 Lele20g0972 20 15797508 15802300 CCT
Lele22g1733 22 22678538 22684466 Lele20g0972 20 15797508 15802300 CCT
Lele23g0249 23 1720499 1725172 Lele20g0972 20 15797508 15802300 CCT
Lele24g1700 24 22339545 22344881 Lele20g0972 20 15797508 15802300 CCT
Lele20g0972 20 15797508 15802300 Lele21g1768 21 25399459 25402014 CCT
Lele20g0972 20 15797508 15802300 Lele22g1744 22 22758012 22760524 CCT
Lele20g0972 20 15797508 15802300 Lele23g0240 23 1643838 1646457 CCT
Lele20g0972 20 15797508 15802300 Lele24g1709 24 22410924 22413395 CCT
Lele17g1077 17 21258387 21262468 Lele20g0972 20 15797508 15802300 hybridization
Lele18g0464 18 2697927 2702888 Lele20g0972 20 15797508 15802300 hybridization