Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1733 ATGAAAGACAACACTGGATTTGCATTACAGAGCCTGTTGTTCTTCTCCAGCCACCTTTCATTGGAAGCTTTTGTTGGCAGATGTTCAATGAGAAAAGCGTACTACGGCGTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCGGGTTCTGTATATCTCCTACTCTGTTCTGTGGCGGGGGAGCATGGCGAAGCTTCCCAATATGTTGTCTTTGTGGAACTTGTTGGTTTTATCTCTGGCGTTAAATGTGAGTTTGATACTGAGAATGGTGTATGAGAGTGAAGAAGGCTACAGAGGTTCTTCTTGCTTCAAGAAACAGGGAGATGGCCAAGTCTTTAACGAGGCACGTTTAACCATATCATCCTCGTCGTCGTCTTCTTCTTCTTCTTCCAGTTTGGCTAATTCTTCTCGTGCCAATCATCCACAAGGCCACGGAAGAGTGATAAATCTGGATCACGGAGATCCGACAGTTTATGAGACATTTTGGCGACAAATGGGTGACAAGACCACGATTACAATCCCAGGATGGCAATCCATGAGCTATTTCTCCGATGCTTCCAACATTTGTTGGTTTCTAGAGCGTGAGTTAGCGAAGGAAGTGGTGAGATTGCACAATGTGGTCGGCAATGCCGCCACAGAAGGTCGCCATATTGTAGTTGGAACAGGTTCTTCTCAGCTCTTTCTTGCTGCTCTTTATGCTCTGTCTCCTCCTGATGCATCTGAACCAATCAGCGTTGTCTCCGCCGCACCATATTACTCGTCATACCCATCAATGACTGATTATCAGAAATCAGGACTCTACAAATGGGCTGGCGATGCAGATAGTTTTGACAAAGAAGGACCTTACATTGAGCTTGTTACTTCCCCAAACAACCCTGATGGATATGTGAGGCGCTCTGTGGTGAACCGAAGCCAAGGATTATTGGTTCATGACCTTGCCTATTATTGGCCTCAATATACTCCTATCTCTTCCCCTGCAGATCATGAGCTCACACTTTTCACTGTTTCTAAAAGCACTGGCCATGCAGGAATGCGAATAGGGTGGGCACTTGTGAAGGACCCAGAGGTAGCAAAGAAAATGACTAAATTTATAGAGCTGAATACAATAGGTGTGTCAAAGGACTCGCAGCTGAGAGCTGCCAAGGTTTTGAGGGCAGTGTCCGATAGCTGCGAGCAAGAAAGAAGCTCCCAAGGGGCAGAGTCATTCTTCAAGTACAGCTACGATCTCATGTCTCAGAGGTGGAAGCATCTCAGAGCAACAGTTGAACGTAGTGGAATGTTCAGTTTGCCAAGCTTTTCTCCTGCGTTCTGCACCTTCTTCACTCAGGTCCTTGAACCTCAACCTGCTTTCGTGTGGTTGAAGTGTGAGGGGGATGTAGAAGACTGTGAGAGTTTTCTTAGAGGACACAAGATCTTAACACGAAGCGGGAGGCATTTTGGGGTTAGCCCCAAATATGTGAGAATTAGCATGCTCGACACAGATGAAAATTTCATGCAGTTTTTAGACAGATTGTCTGCCATACAGTCATGA 1536 0.4596 MKDNTGFALQSLLFFSSHLSLEAFVGRCSMRKAYYGVLLLLLLLPPPPPRVLYISYSVLWRGSMAKLPNMLSLWNLLVLSLALNVSLILRMVYESEEGYRGSSCFKKQGDGQVFNEARLTISSSSSSSSSSSSLANSSRANHPQGHGRVINLDHGDPTVYETFWRQMGDKTTITIPGWQSMSYFSDASNICWFLERELAKEVVRLHNVVGNAATEGRHIVVGTGSSQLFLAALYALSPPDASEPISVVSAAPYYSSYPSMTDYQKSGLYKWAGDADSFDKEGPYIELVTSPNNPDGYVRRSVVNRSQGLLVHDLAYYWPQYTPISSPADHELTLFTVSKSTGHAGMRIGWALVKDPEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSCEQERSSQGAESFFKYSYDLMSQRWKHLRATVERSGMFSLPSFSPAFCTFFTQVLEPQPAFVWLKCEGDVEDCESFLRGHKILTRSGRHFGVSPKYVRISMLDTDENFMQFLDRLSAIQS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1733 511 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 141 508 - -
Lele22g1733 511 Pfam Allinase 150 509 IPR006948 GO:0016846
Lele22g1733 511 MobiDBLite consensus disorder prediction 123 153 - -
Lele22g1733 511 SUPERFAMILY PLP-dependent transferases 147 507 IPR015424 -
Lele22g1733 511 MobiDBLite consensus disorder prediction 123 144 - -
Lele22g1733 511 CDD AAT_like 197 506 - -
Lele22g1733 511 Gene3D - 194 398 IPR015421 GO:0003824
Lele22g1733 511 Gene3D Aspartate Aminotransferase, domain 1 401 510 IPR015422 GO:0003824
Lele22g1733 511 Gene3D - 93 190 IPR037029 GO:0016846
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1733 Lele-ChrLele22 22678538 22684466 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1733 22 22678538 22684466 Lele17g1077 17 21258387 21262468 CCT
Lele22g1733 22 22678538 22684466 Lele18g0464 18 2697927 2702888 CCT
Lele22g1733 22 22678538 22684466 Lele19g0484 19 2729021 2733112 CCT
Lele22g1733 22 22678538 22684466 Lele20g0972 20 15797508 15802300 CCT
Lele22g1733 22 22678538 22684466 Lele22g1733 22 22678538 22684466 ECH
Lele22g1733 22 22678538 22684466 Lele23g0249 23 1720499 1725172 hybridization
Lele22g1733 22 22678538 22684466 Lele24g1700 24 22339545 22344881 hybridization