Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0464 ATGGCCTCAACTTCGCAAAAAACGACGCCTCCTTCTTGCCATACCCCCGCCAATTCACCTCCCGTTTCACGACCCGCAGCGCCATCCGTTGGAGCTGCCAATGCCGTCGGCGAGTGGACTCATCGCGCTGATGATCACCTAGTCAACAAGGTACCCATGACGACTTTGATCAACCCTGTTGATTCGCTCCCAGAACCTTCCACTAATGCTACTGCCACCAAAGGAATCAATTTAATGCCAAGGGCACATTCAAGCCACCCTCTAGATCCTTTATCCGCTGCTGAGATCGCCGTGGCAGTGGCTACTGTCAGAGCAGCTGGAGCCACAGCTGAGGTTGTCAGAGATGCTATGCGCTTCTCTGAAGTTGTTCTACTGGAACCAGACAAGCATGTTGTTGCGCTAGCAGATGCATATTTCTTCCCTCCTTTTCAACCGTCATTACTTCCTAAGATTAAAGGGGGGCCTAATTTTCCGATTAAGCTGCCTCCCAGACGTGCTAAACTCGTCGTTTACAATAAGAATTCAAACCAGACTAGTGTGTGGATTGTTGAACTATCAGAAGTACACGCAGTCACTCGAGGTGGTCACCACAGGGGAAAAGTAATTTCATCACAGGTTATTCCAGATGTTCAGCCTGCAATGGATGCTGAGGAGTATGCAGAATGTGAAGCTGCCGTTAAAGACTTCCCACCATTTAGAGAGGCTATGAAGAGAAGGGGCATTGAAGACATGGACCTTGTAATGGTTGATCCCTGGTGTGCTGGTTATCATAGCCCAGATGATGCTCCCAGCCGAAGACTGGCTAAACCACTTATATTTTGTCGTAATGTGAGTGATTGCCCAATGGAAAATGGCTATGCACGTCCAGTTGAGGGCATCTTTGTGCGTGTTGATATGCAGAAGATGGAGGTGATTGAATTTGAAGACCGTAAACTTGTTCCTCTGCCTCCAGTTGATCCCTTGAGGAACTATACTGCTAGTGAAACAAGAGGTGGCTCTGATAGAGGTGATGTAAAACCCTTACAGATCATTCAACCTGAAGGTCCAAGCTTTCGAGTTAATGGTCGCTATGTAGAATGGCAGAAGTGGAATTTTCTAATTGGATTTACACCCAGAGAAGGCTTGGTTATACATTCTGTCGCTTACGTTGATGGTAGTCGAGGGAGAAGGCCTGTTGCGCATAGGTTGAGTTTTGTGGAGATGGTTGTGCCTTATGGAGATCCAAATGATCCCCATTACAGAAAAAATGCTTTTGATGCTGGCGAAGATGGCTTGGGAAAAAATGCCCATTCTCTCAAGAAGGATTGTGATTGTTTGGGGGTCATTAAATATTTTGATGCTCACTTCACAAATTTTACTGGAGGAGTTGAGACAATTGAAAATTGTGTTTGTTTGTATGAAGAGGATTATGGAATCCTATGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGTCCGAAGGTCAAGAAGACTTTCGGTTTCCTTTATATGTACAGTGGCCAACTACGAGTATGGATTTTTCTGGCACTTTTATCAGGATGGAAAAATTGAAGCTGAGGTCAAGCTAACTGGAATCCTCAGCTTAGGAGCGTTGATACCTGGAGAGTCTAGAAAATATGGTACCACGATTGCACCAGGCTTGTATGCTCCCGTCCACCAACACTTCTTTGTTGCTCGCATGGACATGGCTGTTGATTCTAAACCTGGTGAAGCTTTGAATCAGGTTGTGGAGGTCAATGTCAGAGTTGAGAAGCCTGGGGATGATAATGTTCACAATAATGCATTCTATGCGGAAGAGACTCTGCTCAGATCTGAATCGGGAGCCATGAGGGATTGCAATCCTTTGACCAATCGACACTGGATTGTGAGGAATACCAGAACAGGAAATAGAACGGGGCAACTAACAGGATACAAGCTAGTACCTGGTTCAAACTGCTTACCATTAGCAGGTTCAGAGGCCATGTTCTTGAGAAGAGCTGCATTCTTGAAGCATAATCTTTGGGTAACGCCATATTCACGCGAGGAGATGTTCCCAGGAGGGGAATTCCCTAATCAAAACCCTCGTATAGGTGACGGATTAGCTTCGTGGGTGAAGCAGAATCGATCATTGGAAGAAGCAGATATAGTTCTATGGTACGTATTTGGAATCACTCATGTGCCTCGGTTAGAAGACTGGCCTGTTATGCCAGTAGAGCGCATTGGTTTTATGCTCATGCCTCATGGATTCTTCAATTGCTCGCCTGCAGTAGATGTGCCCCCTAATGCATGTGAGATGGAGAATAAGGAGAATGAGAGCAAAGGCAGCAAGCCTATCCAGAGAGGATTAGCGTCTAACCTTTTGACACTTGTCTCCTTCCTCAAATCCTTTATTTGTCTGTTACGTTGCTCTCCTCCTTCGTAA 2403 0.4586 MASTSQKTTPPSCHTPANSPPVSRPAAPSVGAANAVGEWTHRADDHLVNKVPMTTLINPVDSLPEPSTNATATKGINLMPRAHSSHPLDPLSAAEIAVAVATVRAAGATAEVVRDAMRFSEVVLLEPDKHVVALADAYFFPPFQPSLLPKIKGGPNFPIKLPPRRAKLVVYNKNSNQTSVWIVELSEVHAVTRGGHHRGKVISSQVIPDVQPAMDAEEYAECEAAVKDFPPFREAMKRRGIEDMDLVMVDPWCAGYHSPDDAPSRRLAKPLIFCRNVSDCPMENGYARPVEGIFVRVDMQKMEVIEFEDRKLVPLPPVDPLRNYTASETRGGSDRGDVKPLQIIQPEGPSFRVNGRYVEWQKWNFLIGFTPREGLVIHSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKDCDCLGVIKYFDAHFTNFTGGVETIENCVCLYEEDYGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYGFFWHFYQDGKIEAEVKLTGILSLGALIPGESRKYGTTIAPGLYAPVHQHFFVARMDMAVDSKPGEALNQVVEVNVRVEKPGDDNVHNNAFYAEETLLRSESGAMRDCNPLTNRHWIVRNTRTGNRTGQLTGYKLVPGSNCLPLAGSEAMFLRRAAFLKHNLWVTPYSREEMFPGGEFPNQNPRIGDGLASWVKQNRSLEEADIVLWYVFGITHVPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPPNACEMENKENESKGSKPIQRGLASNLLTLVSFLKSFICLLRCSPPS 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0464 800 Gene3D - 216 319 - -
Lele18g0464 800 Gene3D - 69 214 - -
Lele18g0464 800 Pfam Copper amine oxidase, N2 domain 86 186 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lele18g0464 800 FunFam Amine oxidase 331 756 - -
Lele18g0464 800 Pfam Copper amine oxidase, N3 domain 212 315 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lele18g0464 800 SUPERFAMILY Amine oxidase N-terminal region 83 212 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lele18g0464 800 SUPERFAMILY Amine oxidase catalytic domain 335 754 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lele18g0464 800 FunFam Amine oxidase 217 320 - -
Lele18g0464 800 Pfam Copper amine oxidase, enzyme domain 341 749 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lele18g0464 800 PANTHER COPPER AMINE OXIDASE 81 765 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lele18g0464 800 FunFam Amine oxidase 70 214 - -
Lele18g0464 800 SUPERFAMILY Amine oxidase N-terminal region 211 328 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lele18g0464 800 MobiDBLite consensus disorder prediction 1 31 - -
Lele18g0464 800 Gene3D Copper amine oxidase, catalytic domain 327 754 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0464 Lele-ChrLele18 2697927 2702888 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1757 21 25331341 25335755 Lele18g0464 18 2697927 2702888 CCT
Lele22g1733 22 22678538 22684466 Lele18g0464 18 2697927 2702888 CCT
Lele23g0249 23 1720499 1725172 Lele18g0464 18 2697927 2702888 CCT
Lele24g1700 24 22339545 22344881 Lele18g0464 18 2697927 2702888 CCT
Lele18g0464 18 2697927 2702888 Lele21g1768 21 25399459 25402014 CCT
Lele18g0464 18 2697927 2702888 Lele22g1744 22 22758012 22760524 CCT
Lele18g0464 18 2697927 2702888 Lele23g0240 23 1643838 1646457 CCT
Lele18g0464 18 2697927 2702888 Lele24g1709 24 22410924 22413395 CCT
Lele18g0464 18 2697927 2702888 Lele19g0484 19 2729021 2733112 hybridization
Lele18g0464 18 2697927 2702888 Lele20g0972 20 15797508 15802300 hybridization