Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1700 ATGTGCTGTTTAGCCCCAGAACGCCTTCATATTTCCCTCCCCTGTTTATATTCTTTACAGATCATTCTCTGTTTCCATGACAACACTGGATTTGCATTACAGAGCCTGTTGTTCTTCTCCAGCCACCTTTCATTGGAACCTCTTGTTGGCAGATGTTCAATGAGAAAAGCGTACTACGGTGTTCTTCCTCCTCCTCCTCGGGTTCTGTATATCTCCTACTCTGTTCTGTGGGGGGGGAGCATGGCGAAGCTTCCCAATATGTTGTCTTTGTGGAACTTGTTGGTTTTATCTCTGGCGTTAAATGTTAGTTTGATACTGAGAATGGTGTATGAGAGTGAAGAAGGCTACAGAGGTTCTTCTTGCTTCAAGAAACAGGGAGATGGCCATGTTTTTCACGAGGCACGTTTAACCATATCGTCATCGTCGTCGTCGTCGTCGTCGTCTTCTTCTTCTTCCAGTTTGGCTAATTCTTCTCGTGCCAATCATCCACAAGGCAACGGAAGAGTGATAAATCTGGATCACGGAGATCCGACAGTTTATGAGACATTTTGGCGACAAATGGGTGACAAGACCACGATTACAATCCCAGGATGGCAATCCATGAGCTATTTCTCCGATGCTTCCAACATTTGTTGGTTTCTAGAGCGTGAGTTAGCGAAGGAAGTGGTGAGATTGCACAATGTGGTCGGCAATGCCGTCACAGAAGGTCGCCATATTGTAGTTGGAACAGGTTCTTCTCAGCTCTTTCTTGCTGCTCTTTATGCCCTGTCTCCTCCTGATGCATCTGAACCAATCAGCGTTGTCTCCGCCGCACCATATTACTCGTCATACCCATCAATGACTGATTACCAGAAATCAGGACTCTACAAATGGTCTGGCGATGCAGATAGTTTTGGCAAAGAAGGACCTTACATTGAGCTTGTTACTTCCCCAAACAACCCTGATGGATATGTGAGGCGCTCCGTGGTGAACCGAAGCCAAGGATTATTGGTTCATGACCTTGCCTATTATTGGCCTCAATATACTCCTATCTCTTCCCCTGCAGATCATGAGCTCACACTTTTCACCGTTTCTAAAAGCACTGGCCATGCAGGAATGCGAATAGGGTGGGCACTTGTGAAGGACCCAGAGGTAGCAAAGAAAATGACTAAATTTATAGAGCTGAATACAATAGGTGTGTCAAAGGATTCGCAGCTGAGAGCTGCCAAGGTTTTGAGGGCAGTGTCCGATAGCTGTGAGCAAGAAAGAAGCTCCCAAGGGGCAGAGTCATTCTTCAAGTACAGCTACGATCTCATGTCTCAGAGGTGGAAGCAGCTCAGAGCAACAGTTGAACGTAGGGGAATGTTCAGTTTGCCAAGCTTTTCTCCTGCGTTCTGCACCTTCTTCACTCAGGTCCTTGAACCTCAACCTGCTTTCGTGTGGTTGAAGTGTGAGGGGGATGTAGAAGATTGTGAGAGTTTTCTTAGAGGACACAAGATCTTAACACGAAGTGGGAGGCATTTTGGGGTTAGCCCTAAATACGTGAGAATTAGCATGTTGGACACAGATGAAAATTTCATGCAGTTTTTAGACAGATTGTCTGCCATACAGTCATGA 1596 0.4599 MCCLAPERLHISLPCLYSLQIILCFHDNTGFALQSLLFFSSHLSLEPLVGRCSMRKAYYGVLPPPPRVLYISYSVLWGGSMAKLPNMLSLWNLLVLSLALNVSLILRMVYESEEGYRGSSCFKKQGDGHVFHEARLTISSSSSSSSSSSSSSSLANSSRANHPQGNGRVINLDHGDPTVYETFWRQMGDKTTITIPGWQSMSYFSDASNICWFLERELAKEVVRLHNVVGNAVTEGRHIVVGTGSSQLFLAALYALSPPDASEPISVVSAAPYYSSYPSMTDYQKSGLYKWSGDADSFGKEGPYIELVTSPNNPDGYVRRSVVNRSQGLLVHDLAYYWPQYTPISSPADHELTLFTVSKSTGHAGMRIGWALVKDPEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSCEQERSSQGAESFFKYSYDLMSQRWKQLRATVERRGMFSLPSFSPAFCTFFTQVLEPQPAFVWLKCEGDVEDCESFLRGHKILTRSGRHFGVSPKYVRISMLDTDENFMQFLDRLSAIQS 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1700 531 MobiDBLite consensus disorder prediction 140 173 - -
Lele24g1700 531 Gene3D - 214 418 IPR015421 GO:0003824
Lele24g1700 531 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 152 528 - -
Lele24g1700 531 Gene3D Aspartate Aminotransferase, domain 1 421 530 IPR015422 GO:0003824
Lele24g1700 531 CDD AAT_like 217 526 - -
Lele24g1700 531 MobiDBLite consensus disorder prediction 140 165 - -
Lele24g1700 531 SUPERFAMILY PLP-dependent transferases 169 527 IPR015424 -
Lele24g1700 531 Pfam Allinase 170 529 IPR006948 GO:0016846
Lele24g1700 531 Gene3D - 118 210 IPR037029 GO:0016846
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1700 Lele-ChrLele24 22339545 22344881 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1700 24 22339545 22344881 Lele17g1077 17 21258387 21262468 CCT
Lele24g1700 24 22339545 22344881 Lele18g0464 18 2697927 2702888 CCT
Lele24g1700 24 22339545 22344881 Lele19g0484 19 2729021 2733112 CCT
Lele24g1700 24 22339545 22344881 Lele20g0972 20 15797508 15802300 CCT
Lele24g1700 24 22339545 22344881 Lele24g1700 24 22339545 22344881 ECH
Lele21g1757 21 25331341 25335755 Lele24g1700 24 22339545 22344881 hybridization
Lele22g1733 22 22678538 22684466 Lele24g1700 24 22339545 22344881 hybridization