Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0249 ATGGCGAAGCTTCCCAATATGTTGTCTTTGTGGAGCTTCTTGGTGTTATCACTGGCTTTAAATGTGAGTTTGATACTAAGAATTGTGTATGAGAGCGAAGAAGGCTACAGAGGTTCTTCTTGCTTCAAGAAACAGGGAGATGGGCATGTCTTTCACGAGGCACGTTTATCCATATCATCGTCTTCGTCCTCCTCATCGTCTTCATCTTCCAATTTTCCTAATTCTTCTCGTGCCAATCATCCACAAGGCAACGGAAGAGTGATAAATCTCGATCACGGAGATCCGACAGTTTATGAGACATTTTGGCGACAAATGGGTGACAAGACCACGATTACAATCCCAGGATGGCAATCCATGAGCTATTTTTCCGATGCGTCCAACATTTGTTGGTTTCTAGAGCGTGAGTTAGCGAAGGAGTCATACCCATCAATGACTGATTACCAGAAATCAGGACTGTACAAATGGGCTGGCGATGCGGATAGTTTTGACAAAGAAGGACCTTACATTGAGCTAGTTACTTCCCCAAACAACCCTGATGGATTTGTGAGGCGCTCTGTGGTGAACCGAAGCCAAGGATTATTGGTTCATGACCTTGCCTATTATTGGCCTCAATATACTCCTATCTCTTCCCCTGCAGATCATGAGCTTACTCTTTTCACCGTCTCTAAAAGCACTGGCCATGCAGGAATGCGAATAGGGTGGGCACTTGTGAAAGATCTAGAGGTAGCAAAGAAAATGACCAAGTTTATAGAGCTGAATACAATAGGCGTGTCAAAGGACTCGCAGCTGAGAGCTGCCAAGGTTTTAAGGGCAGTGTCCGACAGCTGCGAGCAAGAAAGAAGCTCCCAAGGGGCAGAGTCATTCTTCAAGTACAGCTACGACCTCATGTCTCAGAGGTGGGAGCAGCTCAGAGCAACAGTTGAACGTAGTGGAATGTTCAGTTTGCCAAGCTTTTCTCCTGCGTTCTGCACCTTCTTCACTCAGGTCCTTGAACCTCGACCTGCTTTCGTGTGGTTGAAGTGTGAGGGGGACATAGAGGACTGTGAGAGTTTTCTTCGAGGACATAAGATCTTAACACGAAGTGGGAGGCATTTTGGGGTTAGCCCCACATACGTGAGAATTAGCATGTTGGACACAGATGAAAATTTCATGCAGTTTTTAGACAGATTGTCTGCCATACAATCATGA 1188 0.4571 MAKLPNMLSLWSFLVLSLALNVSLILRIVYESEEGYRGSSCFKKQGDGHVFHEARLSISSSSSSSSSSSSNFPNSSRANHPQGNGRVINLDHGDPTVYETFWRQMGDKTTITIPGWQSMSYFSDASNICWFLERELAKESYPSMTDYQKSGLYKWAGDADSFDKEGPYIELVTSPNNPDGFVRRSVVNRSQGLLVHDLAYYWPQYTPISSPADHELTLFTVSKSTGHAGMRIGWALVKDLEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSCEQERSSQGAESFFKYSYDLMSQRWEQLRATVERSGMFSLPSFSPAFCTFFTQVLEPRPAFVWLKCEGDIEDCESFLRGHKILTRSGRHFGVSPTYVRISMLDTDENFMQFLDRLSAIQS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0249 395 CDD AAT_like 164 390 - -
Lele23g0249 395 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 140 392 - -
Lele23g0249 395 MobiDBLite consensus disorder prediction 60 89 - -
Lele23g0249 395 MobiDBLite consensus disorder prediction 60 83 - -
Lele23g0249 395 Pfam Allinase 141 393 IPR006948 GO:0016846
Lele23g0249 395 Pfam Allinase 88 139 IPR006948 GO:0016846
Lele23g0249 395 SUPERFAMILY PLP-dependent transferases 87 391 IPR015424 -
Lele23g0249 395 Gene3D Aspartate Aminotransferase, domain 1 285 394 IPR015422 GO:0003824
Lele23g0249 395 Gene3D - 98 282 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0249 Lele-ChrLele23 1720499 1725172 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0249 23 1720499 1725172 Lele17g1077 17 21258387 21262468 CCT
Lele23g0249 23 1720499 1725172 Lele18g0464 18 2697927 2702888 CCT
Lele23g0249 23 1720499 1725172 Lele19g0484 19 2729021 2733112 CCT
Lele23g0249 23 1720499 1725172 Lele20g0972 20 15797508 15802300 CCT
Lele23g0249 23 1720499 1725172 Lele23g0249 23 1720499 1725172 ECH
Lele21g1757 21 25331341 25335755 Lele23g0249 23 1720499 1725172 hybridization
Lele22g1733 22 22678538 22684466 Lele23g0249 23 1720499 1725172 hybridization