Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1768 ATGAAGGAAAATTCAGTTTCCTGTACAAATCATCATGAGAATGAATCATTTTCTGCAGAAACAAGAAGACAAACAAGAGCACAACACAATCATTCTCTGAAATTGGCTCCTCTTACTTTTGTTGCTTTCCTGTTTGTTCTTTCTTCAATTAGCCCAGTCTTGTCTCACCCCTTACCCTCCAACCAAACCCTCAGAATCAGAGCTATTTTAAGCAAGATCAACAAGCCTTCTTTGAAGACAATTCAGAGCCCAGATGGGGATTTGATTGACTGTGTTCCATTTCATCAGCAGCCAGCTTTTGACCATCCTGAGCTTCAAGGACTAATAAGACAGAGACACTTGGATCCACCAGAAAGGCCAAGAGGCTACGACATTAATGCAGAAACAGAATCAGAAAGCTTTCAGCTCTGGACAGATTCTGGTGAGTCATGCCCAGAAGGAACTGTTCCAATCAGGAGAGCAACAGAGGAAGATGTTCTGAGATCAAGTTCCATTCAGAGATTTGGACAAAAACATGGTAGAAATGTACGGAGAGATTCATCTGCCAGTGGTCATGAGCATGCAGTGGTATTTGTGAATGGAGATCAATATTATGGAGCAAAGGCGAGTATAAACGTATGGGCACCCCAAGTGAGGAATCAAGAAGAATTTAGCTTGTCCCAGATATGGGTTATTGCTGGATCCTTTGAGAATGATCTAAATACCATAGAAGCTGGTTGGCAGGTGAGCCCGCGGCTATATGGAGATAATAATCCGAGGTTCTTCACTTATTGGACGACAGATGCATATCAAGTGACAGGATGCTACAACTTGCTGTGCTCAGGATTTGTTCAAACCAACAACAGGATAGCAATGGGAGCTGCAATATCCCCAAGATCTGTATTTAATGGAAGACAGTTTGACATTGCCTTAATGATTTGGAAGGATCCGAAACATGGGCACTGGTGGCTGGAGATCGGGCCGGGCGGGCTAGTCGGGTACTGGCCGGCGAACTTATTCAGTCACCTGAGGAGGGAGGCGAGCATGGTGCAATTTGGAGGGGAAATAGTGAACTCAGGGTCAGTGGGTTACCACACAAGCACTGAAATGGGAAGTGGCCAATTTGCAGAAGGAGGGTACAGAAAAGCAGCATATTTCAGGAATTTACAAGTAGTGGATTGGGATAATAGTTTGCTTCCTCTATCCAACATTCATCAATTGGCTGATCATTCCAATTGCTATGACATCAGGTTGGGATCAAACCAAGCTTGGGGAACTTACTTTTATTATGGAGGCCCTGGAAGGAATCTCAGATGCCCTTGA 1302 0.4416 MKENSVSCTNHHENESFSAETRRQTRAQHNHSLKLAPLTFVAFLFVLSSISPVLSHPLPSNQTLRIRAILSKINKPSLKTIQSPDGDLIDCVPFHQQPAFDHPELQGLIRQRHLDPPERPRGYDINAETESESFQLWTDSGESCPEGTVPIRRATEEDVLRSSSIQRFGQKHGRNVRRDSSASGHEHAVVFVNGDQYYGAKASINVWAPQVRNQEEFSLSQIWVIAGSFENDLNTIEAGWQVSPRLYGDNNPRFFTYWTTDAYQVTGCYNLLCSGFVQTNNRIAMGAAISPRSVFNGRQFDIALMIWKDPKHGHWWLEIGPGGLVGYWPANLFSHLRREASMVQFGGEIVNSGSVGYHTSTEMGSGQFAEGGYRKAAYFRNLQVVDWDNSLLPLSNIHQLADHSNCYDIRLGSNQAWGTYFYYGGPGRNLRCP 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1768 433 Pfam Neprosin 215 426 IPR004314 -
Lele21g1768 433 FunFam Putative carboxyl-terminal proteinase 206 325 - -
Lele21g1768 433 Gene3D - 206 320 - -
Lele21g1768 433 MobiDBLite consensus disorder prediction 1 25 - -
Lele21g1768 433 Pfam Neprosin activation peptide 80 190 IPR025521 -
Lele21g1768 433 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 66 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1768 Lele-ChrLele21 25399459 25402014 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1077 17 21258387 21262468 Lele21g1768 21 25399459 25402014 CCT
Lele18g0464 18 2697927 2702888 Lele21g1768 21 25399459 25402014 CCT
Lele19g0484 19 2729021 2733112 Lele21g1768 21 25399459 25402014 CCT
Lele20g0972 20 15797508 15802300 Lele21g1768 21 25399459 25402014 CCT
Lele21g1768 21 25399459 25402014 Lele22g1744 22 22758012 22760524 ECH
Lele21g1768 21 25399459 25402014 Lele21g1768 21 25399459 25402014 ECH
Lele21g1768 21 25399459 25402014 Lele23g0240 23 1643838 1646457 hybridization
Lele21g1768 21 25399459 25402014 Lele24g1709 24 22410924 22413395 hybridization