Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1757 ATGGCGAAGCTTCCCAATATGTTGTCTTTGTGGAACTTGTTGGTGTTATCACTGGCTTTAAATGTGAGTTTGATACTACGAATTGTGTATGAGAGCGAAGAAGGCTACAGAGGTTCTTCTTGCTTCAAGAAACAGGGAGATGGGCATGTCTTTCACGAGGCACGTTTAACCATATCGTCGTCTTCGTCCTCCTCATCGTCTTCATCTTCCAATTTGGCTAATTCTTCTCGTGCCAATCATCCACAAGGCGACGGAAGAGTGATAAATCTCGATCACGGAGATCCGACAGTTTATGAGACATTTTGGCGACAAATGGGTGACAAGACTACGATTACAATCCCAGGATGGCAATCCATGAGCTATTTTTCCGATGCGTCCAACATTTGTTGGTTTCTAGAGCGTGAGTTAGCGAAGGAGGTGGTGAGATTGCACAATGTGGTCGGCAATGCCGTCACAGAAGGTCGCCATATTGTAGTTGGGACAGGTTCTTCTCAGCTCTTTCTTGCTGCTCTTTATGCTCTGTCTCCTCCTGATGCATCTGAACCAATCAGCGTTGTCTCCGCCGCACCATATTACTCGTCATACCCATCAATGACTGATTACCAGAAATCAGGACTGTACAAATGGGCTGGCGATGCGGATAGTTTTGACAAAGAAGGACCTTACATTGAGCTAGTTACTTCCCCAAACAACCCTGATGGATTTGTGAGGCGCTCTGTGGTGAACCGAAGCCAAGGATTATTGGTTCATGACCTTGCCTATTATTGGCCTCAATATACTCCTATCTCTTCCCCTGCAGATCATGAGCTTACTCTTTTCACCGTCTCTAAAAGCACTGGCCATGCAGGAATGCGAATAGGGTGGGCACTTGTGAAAGATCAAGAGGTAGCAAAGAAAATGACGAAGTTTATAGAGCTGAATACAATAGGCGTGTCAAAGGACTCGCAGCTGAGAGCTGCTAAGGTTTTAAGGGCAGTGTCCGACAGCTGCGAGCAAGAAAGAAGCTCCCAAGGCGCAGAGTCATTCTTCAAGTACAGCTACGACCTCATGTCTCAGAGGTGGGAGCAGCTCAGAGCAACAGTTGAACGTAGTGGAATGTTCAGTTTGCCAAGCTTTTCTCCTGCGTTCTGCACCTTCTTCACTCAGGTCCTTGAACCTCAACCTGCTTTCGTGTGGTTGAAGTGTGAGGGGGACATAGAGGACTGTGAGAGTTTTCTTCGAGGACACAAGATCTTAACACGAAGTGGGAGGCATTTTGGGGTTAGCCCCACATACGTGAGAATTAGCATGTTGGACACAGATGAAAATTTCATGCAGTTTTTAGACAGATTGTCTGCCATACAATCATGA 1350 0.4637 MAKLPNMLSLWNLLVLSLALNVSLILRIVYESEEGYRGSSCFKKQGDGHVFHEARLTISSSSSSSSSSSSNLANSSRANHPQGDGRVINLDHGDPTVYETFWRQMGDKTTITIPGWQSMSYFSDASNICWFLERELAKEVVRLHNVVGNAVTEGRHIVVGTGSSQLFLAALYALSPPDASEPISVVSAAPYYSSYPSMTDYQKSGLYKWAGDADSFDKEGPYIELVTSPNNPDGFVRRSVVNRSQGLLVHDLAYYWPQYTPISSPADHELTLFTVSKSTGHAGMRIGWALVKDQEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSCEQERSSQGAESFFKYSYDLMSQRWEQLRATVERSGMFSLPSFSPAFCTFFTQVLEPQPAFVWLKCEGDIEDCESFLRGHKILTRSGRHFGVSPTYVRISMLDTDENFMQFLDRLSAIQS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1757 449 SUPERFAMILY PLP-dependent transferases 87 445 IPR015424 -
Lele21g1757 449 Gene3D - 36 128 IPR037029 GO:0016846
Lele21g1757 449 MobiDBLite consensus disorder prediction 60 90 - -
Lele21g1757 449 Gene3D - 132 336 IPR015421 GO:0003824
Lele21g1757 449 Gene3D Aspartate Aminotransferase, domain 1 339 448 IPR015422 GO:0003824
Lele21g1757 449 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 87 446 - -
Lele21g1757 449 CDD AAT_like 135 444 - -
Lele21g1757 449 MobiDBLite consensus disorder prediction 60 82 - -
Lele21g1757 449 Pfam Allinase 88 447 IPR006948 GO:0016846
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1757 Lele-ChrLele21 25331341 25335755 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1757 21 25331341 25335755 Lele17g1077 17 21258387 21262468 CCT
Lele21g1757 21 25331341 25335755 Lele18g0464 18 2697927 2702888 CCT
Lele21g1757 21 25331341 25335755 Lele19g0484 19 2729021 2733112 CCT
Lele21g1757 21 25331341 25335755 Lele20g0972 20 15797508 15802300 CCT
Lele21g1757 21 25331341 25335755 Lele21g1757 21 25331341 25335755 ECH
Lele21g1757 21 25331341 25335755 Lele23g0249 23 1720499 1725172 hybridization
Lele21g1757 21 25331341 25335755 Lele24g1700 24 22339545 22344881 hybridization