Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma15g00189 ATGTTCTCCTCAACCAGATGCGCTTTCCTGAGCAACTCAGGTTTAGGTGGGTGCAGCAGCTTGTGTGATGCGCAGAGAAAGCGTTCAACTCGTTTCAGGGTGGTGAGTATGACCCCAAGCAGCAGCAGGTCCGGTGATAGAAACGGCAGCGTTGTGATGGAGACGCCGTTGAAAGAATTGAAAAAGGAATCCACGGTGGCTGACGTGGACAACAATCCCATCTCCGCCGGTGGCCCTCAAGATGTTTACGGCGAGGATAGGGCTACGGAGGATCACTTTGTTACCCCTTGGAGTGTTTCTGTTGCCAGTGGTTATACACTGTTGCGAGATCCCCACTTCAACAAAGGGTTGGCCTTCACTGAAAATGAGAGGGATGCCCACTACTTGCGTGGTCTTCTTCCCCCATCAGTTATTCCTCAAGAAACTCAGGTGAAGAAAATGATCCAGCACGTACGCCAGTATCAAGTTCCATTGCAGAAGTATATGGCAATGATGGATCTTCAGgagagaaacgaacggttattttacaaacttcttattgatcatgttgaagagttacttccagttgtatatactccaactgttggtgaagcttgccagaaatatgggagcatctttatgcgtcctcagggtctttatataagtttgaaagagaaggggaagatccgtgaagtgctaaggaattggcctgagaagaacattcaagtcatagttgtaactgatggagaacggatcctgggtcttggggatcttggttgtcaggggatgggaataccagtgggaaaactttctttatatacagcacttggaggagtgcgcccttcagctTGTTTGCCTATTACCATTGATGTGGGTACAAACAATGAGAAGCTGCTGAATGATGAATTATACATTGGGCTAAAGCAAAGACGAGCAACTGGGCAGGAATATGCTGAACTTATGCACGAATTTATGACAGCAGTCAAGCAAACTTATGGGGAAAAAGTTCTAATTCAGTTTGAAGACTTTGCAAACCACAATGCTTTTGATCTGCTTGAGAAATATAGATCTACACATCTGGTCTTTAATGATGATATTCAGGGAACAGCATCCGTGGTTCTTGCTGGACTTGTTGCAGCTCTGAAGTTGGTTGGGGGTAACTTAGCTGATCACAGATTCTTATTCCTTGGTGCTGGAGAGGCTGGCACTGGCATAGCAGAACTCATAGCACTTGAAACATCAAAACAGACAAATGCTCCACTGGAGGAAGTGCGCAAGAATATTTGGTTGGTGGACTCAAAGGGATTGATTGTCAGTTCCCGCAAAGATTCGCTCCAACATTTTAAGAAGCCCTGGGCTCATGAGCATGAACCTGTTAGAAATCTTGTAGATGCTGTTAATAAAATTAAGCCAACAGTGTTGATTGGAACATCGGGACAAGGAAGAACATTTACTAAAGAGGTGATTGAGGCAATGGCTTCTATTAACGAGAGACCTATTATTCTTTCTCTTTCCAACCCTACGTCACAGTCAGAATGCACTGCTGAAGAAGCTTACAAGTGGAGCCAGGGACGTGCCATTTTTGCAAGTGGGAGCCCATTTCCTCCTGTTGAGTATGAGGGGAAAGTGTTTGTGCCTGGCCAGGCCAATAATGCATACATATTTCCTGGATTTGGTCTTGGTTTAATAATGTCTGGGACCATTCGAGTGCATGATGACCTGCTTCTGGCTGCCTCTGAGGCTTTGGCTGCACAAGTGAGCCAAGAGAACTTTGATAAGGGACTCATATACCCACCATTCACCAACATAAGAAAGATTTCAGCACACATAGCTGCCAATGTTGCTGCTAAGGCTTATGAGCTTGGCTTGGCCACTCGCCTTCCTCAACCTAAAGATTTGGTGAAGTTTGCAGAGAGCTGTATGTATACCCCATCCTACCGAAGCTACCGGTGA 1932 0.3825 MFSSTRCAFLSNSGLGGCSSLCDAQRKRSTRFRVVSMTPSSSRSGDRNGSVVMETPLKELKKESTVADVDNNPISAGGPQDVYGEDRATEDHFVTPWSVSVASGYTLLRDPHFNKGLAFTENERDAHYLRGLLPPSVIPQETQVKKMIQHVRQYQVPLQKYMAMMDLQERNERLFYKLLIDHVEELLPVVYTPTVGEACQKYGSIFMRPQGLYISLKEKGKIREVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLNDELYIGLKQRRATGQEYAELMHEFMTAVKQTYGEKVLIQFEDFANHNAFDLLEKYRSTHLVFNDDIQGTASVVLAGLVAALKLVGGNLADHRFLFLGAGEAGTGIAELIALETSKQTNAPLEEVRKNIWLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVRNLVDAVNKIKPTVLIGTSGQGRTFTKEVIEAMASINERPIILSLSNPTSQSECTAEEAYKWSQGRAIFASGSPFPPVEYEGKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALAAQVSQENFDKGLIYPPFTNIRKISAHIAANVAAKAYELGLATRLPQPKDLVKFAESCMYTPSYRSYR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma15g00189 643 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 359 642 IPR036291 -
Gma15g00189 643 PANTHER NADP-DEPENDENT MALIC ENZYME 4, CHLOROPLASTIC 74 643 - -
Gma15g00189 643 SMART Malic_M_2 359 612 IPR012302 GO:0051287
Gma15g00189 643 SMART malic_2 168 349 IPR012301 GO:0004471
Gma15g00189 643 Pfam Malic enzyme, NAD binding domain 359 611 IPR012302 GO:0051287
Gma15g00189 643 Gene3D - 357 643 - -
Gma15g00189 643 PRINTS Malic enzyme signature 174 198 IPR001891 GO:0004470|GO:0004471
Gma15g00189 643 PRINTS Malic enzyme signature 234 263 IPR001891 GO:0004470|GO:0004471
Gma15g00189 643 PRINTS Malic enzyme signature 270 292 IPR001891 GO:0004470|GO:0004471
Gma15g00189 643 PRINTS Malic enzyme signature 330 348 IPR001891 GO:0004470|GO:0004471
Gma15g00189 643 PRINTS Malic enzyme signature 355 371 IPR001891 GO:0004470|GO:0004471
Gma15g00189 643 PRINTS Malic enzyme signature 386 402 IPR001891 GO:0004470|GO:0004471
Gma15g00189 643 PRINTS Malic enzyme signature 489 505 IPR001891 GO:0004470|GO:0004471
Gma15g00189 643 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Gma15g00189 643 ProSitePatterns Malic enzymes signature. 355 371 IPR015884 GO:0004471
Gma15g00189 643 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 82 358 IPR046346 -
Gma15g00189 643 PIRSF ME 58 643 IPR001891 GO:0004470|GO:0004471
Gma15g00189 643 PANTHER MALIC ENZYME-RELATED 74 643 - -
Gma15g00189 643 Pfam Malic enzyme, N-terminal domain 168 349 IPR012301 GO:0004471
Gma15g00189 643 CDD NAD_bind_1_malic_enz 359 637 - -
Gma15g00189 643 Gene3D - 102 356 IPR037062 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma15g00189 Gma-Chr15 1515642 1521470 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma15g00189 K00029 - gmx:100791514 1240.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03176 13 45899324 45905038 Gma15g00189 15 1515642 1521470 ECH
Gma08g00328 08 2783868 2788254 Gma15g00189 15 1515642 1521470 ECH
Gma05g02212 05 43207160 43212678 Gma15g00189 15 1515642 1521470 ECH
Gma15g00189 15 1515642 1521470 Gma08g01846 08 16573003 16578513 ECH
Gma15g00189 15 1515642 1521470 Gma13g03176 13 45899324 45905038 ECH
Gma15g00189 15 1515642 1521470 Gma15g00189 15 1515642 1521470 ECH
Gma15g00189 15 1515642 1521470 Gma04g00784 04 7440357 7445425 ECH
Gma15g00189 15 1515642 1521470 Gma06g00777 06 7047642 7052919 ECH
Gma13g03176 13 45899324 45905038 Gma15g00189 15 1515642 1521470 GST
Gma15g00189 15 1515642 1521470 Gma07g00150 07 1273785 1276303 PCT
Gma15g00189 15 1515642 1521470 Gma08g01846 08 16573003 16578513 PCT
Gma07g00150 07 1273785 1276303 Gma15g00189 15 1515642 1521470 PCT
Gma08g01846 08 16573003 16578513 Gma15g00189 15 1515642 1521470 PCT