Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g00328 ATGGGACACGGGTGCTTATTAAACTTAGGATTTTCTGGCTGCCGTGGAGTTAATTCAAAGAGAAAAGTCTCAAAGGATCATACTCATACTCATAACACTGGTGAAGAGAAGAAGAAAGTAATTGGTAGGgaaatggagagtacactgaaggccttgagagatggagagtcagtgttggacctcagcccaagatccaccgtcagtggcggcgttgaggacatctacggcgaggatcgcgccaccgaggaccaacttgttatcccatggacTGTCTCGGTTGCCAATGGGTACTCTTTGCTAAGGGATCCACAGTACAACAAAGGGCTAGCTTTCACTGAGAAAGAGAGGGATGCACACTATTTGCCAGGCCTCCTGCCTCCCACAGTCAGCACTCAGCAACTTCAGATTTATCTATTAATATCTATGAGGGAGAAGAAACTGATGAACAGCATCAGGCAATATCAGGTTCCCTTGCAAAAGTACGTGGCCATGATGGACCTTCAGGAGAGGAATGAAAGACTATTTTACAAACTTCTAATTGATAATGTTGAGGAATTGCTCCCAGTTAAATATGGGAGCATATTCAGACGTCCTCAGGGTCTTTACATTAGTTTGAAAGAGAGGGGTAAAATCCTCGAGGTTTTAAAAAACTGGCCTGAGAGGAGTATTCAAGTTATTGTTCTAACCGACGGTGAGTGGATTTTGGGACTTGGGGATCTTGGATGTCAGgggatgggaattcctgttggtaaattggcttcgtacacagcactaggaggagttcgtccttcagcaTGTTTGCCTATTACTATCGATGTGGGGACAAATAATGAGAAATTATTGAATGATGAATTTTACATTGGGCTTAGACAAAAGAGGGCAACTGGGCAGGAGTATTATGACCTTATGCATGAGTTTATGACTGCTGTGAAGCAAAACTACGGGGAAAATGTTCTTGTACAGTTTGAAGACTTTGCAAATCACAATGCTTTTGAGTTGCTTGCTAAATATGGGACAACTCATCTCGTTTTCAATGACGATATACAGGGGACTGCATCTGTTGTTCTAGCTGGAGTTGTAGCAGCCCTAAAGCTCATTGGCGGTACATTGCCTGAGCACACATTCCTCTTCCTTGGTGCTGGAGAAGCAGGAACTGGTATAGCAGAGCTAATAGCTCTTGAGATGTCAAAGCAGACTAAGGCACCCATAGAAGAGACTCGCAAGAAGATATGGCTTGTAGACTCAAAGGGTTTAATTGTTAGTTCGCGGAAGAATTCACTTCAACACTTCAAGAAGCCTTGGGCTCATGAACATGAGCCTGTTAACAGTCTCCTAGAGGCAGTCAAGGTGATCAAGCCAACAGTTTTGATTGGATCATTAGGAGTGGGAAGAACATTTACAAAGGAAGTAGTTGAGGCTATGACTTCAAACAATGATAAACCTCTCATTATGGCTCTCTCCAATCCTACCTCACAGTCTGAGTGTACAGCTGAAGAGGCTTACCAGTGGAGTGAGGGTCGTGCAATTTTTGCTAGTGGGAGTCCATTTGATCCTGTTGAATACAAGGGCAAAGTTTATGCTTCTGGCCAGGCCAACAATGCTTAA 1605 0.3726 MGHGCLLNLGFSGCRGVNSKRKVSKDHTHTHNTGEEKKKVIGREMESTLKALRDGESVLDLSPRSTVSGGVEDIYGEDRATEDQLVIPWTVSVANGYSLLRDPQYNKGLAFTEKERDAHYLPGLLPPTVSTQQLQIYLLISMREKKLMNSIRQYQVPLQKYVAMMDLQERNERLFYKLLIDNVEELLPVKYGSIFRRPQGLYISLKERGKILEVLKNWPERSIQVIVLTDGEWILGLGDLGCQGMGIPVGKLASYTALGGVRPSACLPITIDVGTNNEKLLNDEFYIGLRQKRATGQEYYDLMHEFMTAVKQNYGENVLVQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLAGVVAALKLIGGTLPEHTFLFLGAGEAGTGIAELIALEMSKQTKAPIEETRKKIWLVDSKGLIVSSRKNSLQHFKKPWAHEHEPVNSLLEAVKVIKPTVLIGSLGVGRTFTKEVVEAMTSNNDKPLIMALSNPTSQSECTAEEAYQWSEGRAIFASGSPFDPVEYKGKVYASGQANNA 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g00328 534 PANTHER MALIC ENZYME-RELATED 16 534 - -
Gma08g00328 534 PANTHER MALIC ENZYME 16 534 - -
Gma08g00328 534 SMART malic_2 168 338 IPR012301 GO:0004471
Gma08g00328 534 Gene3D - 94 345 IPR037062 GO:0004471
Gma08g00328 534 Gene3D - 346 534 - -
Gma08g00328 534 ProSitePatterns Malic enzymes signature. 344 360 IPR015884 GO:0004471
Gma08g00328 534 PIRSF ME 57 534 IPR001891 GO:0004470|GO:0004471
Gma08g00328 534 PRINTS Malic enzyme signature 375 391 IPR001891 GO:0004470|GO:0004471
Gma08g00328 534 PRINTS Malic enzyme signature 319 337 IPR001891 GO:0004470|GO:0004471
Gma08g00328 534 PRINTS Malic enzyme signature 344 360 IPR001891 GO:0004470|GO:0004471
Gma08g00328 534 PRINTS Malic enzyme signature 174 198 IPR001891 GO:0004470|GO:0004471
Gma08g00328 534 PRINTS Malic enzyme signature 478 494 IPR001891 GO:0004470|GO:0004471
Gma08g00328 534 SMART Malic_M_2 348 534 IPR012302 GO:0051287
Gma08g00328 534 Pfam Malic enzyme, NAD binding domain 348 534 IPR012302 GO:0051287
Gma08g00328 534 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 348 534 IPR036291 -
Gma08g00328 534 Pfam Malic enzyme, N-terminal domain 168 337 IPR012301 GO:0004471
Gma08g00328 534 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 75 347 IPR046346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g00328 Gma-Chr8 2783868 2788254 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g00328 K00029 - gmx:100804607 1003.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g00328 08 2783868 2788254 Gma08g01846 08 16573003 16578513 ECH
Gma08g00328 08 2783868 2788254 Gma13g03176 13 45899324 45905038 ECH
Gma08g00328 08 2783868 2788254 Gma15g00189 15 1515642 1521470 ECH
Gma08g00328 08 2783868 2788254 Gma04g00784 04 7440357 7445425 ECH
Gma08g00328 08 2783868 2788254 Gma06g00777 06 7047642 7052919 ECH
Gma08g00328 08 2783868 2788254 Gma08g00328 08 2783868 2788254 ECH
Gma05g02212 05 43207160 43212678 Gma08g00328 08 2783868 2788254 GST