Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00150 atgaacattcaagtcattgttgtaactgacggagagcgaattctgggtcttggggatctaggctgtcaggggatgggaataccagtagaaaaactttcttcatattcagcacttggcggagttcgtccttctgctTGCTTGCCTATTACCATCGATGTTGGTACAAACAATGAGAAGTTGTTGAATGATGAATTATATTTTGGGCTCAGGCATAAACGAGCAACTGGACAGTTTGTCAAGCAAAATTATGGTGAAAGAATCCTCGTTCAGTTTGAAGACTTTGCAAACCACAATGCTTTTGATCTACTTGAAAGATATAGGTCAACACATCTTGTCTTTAATGATGATATTCAGggaacagcaccagtggtccttgcaggactagttgcagctctgaaattggttgggggagacttgactgatcacaggttcttattccttggtgctggagagGCTGGCACTGGAATAGCAGAACTCATAGCACTTGAAACATCAAAACGGACAAATGTCCCACTAGATGAAGTGCGCAAGAACATTTGGTTGGTGGATTCAAAGGGTTTGATTGTGAGTTCCCGTAAGGAATCACTTCAACATTTTAAGAAGCCATGGGCTCATGAACATGAACCTGTTAAGGAACTTGTAAATGTTGTTAAGCAAATTAAGCCGACGGTGTTAATTGGAACATCAGGACAAGGGAGAACTTTTACTAAAGATGTGGTTGAAGCTATGGCTTCCATTAATGAGGTAATACGTCAATCTACAATTTCCTACCTACTATGCATTTTGATGTCCACAGAAGCTAATCTATCCATCATTTGTAATGCTTGTAGAAACCTATTATTCTTTCTCTTTCCAACCCGACATCACAGTCGGAATGCACTGCTGAAGAGGCTTAAACTTGGAGCCAGGCATTAA 915 0.2896 MNIQVIVVTDGERILGLGDLGCQGMGIPVEKLSSYSALGGVRPSACLPITIDVGTNNEKLLNDELYFGLRHKRATGQFVKQNYGERILVQFEDFANHNAFDLLERYRSTHLVFNDDIQGTAPVVLAGLVAALKLVGGDLTDHRFLFLGAGEAGTGIAELIALETSKRTNVPLDEVRKNIWLVDSKGLIVSSRKESLQHFKKPWAHEHEPVKELVNVVKQIKPTVLIGTSGQGRTFTKDVVEAMASINEVIRQSTISYLLCILMSTEANLSIICNACRNLLFFLFPTRHHSRNALLKRLKLGARH 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00150 304 Gene3D - 115 251 - -
Gma07g00150 304 PANTHER MALIC ENZYME-RELATED 1 260 - -
Gma07g00150 304 SMART Malic_M_2 117 277 IPR012302 GO:0051287
Gma07g00150 304 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 2 116 IPR046346 -
Gma07g00150 304 Pfam Malic enzyme, N-terminal domain 2 107 IPR012301 GO:0004471
Gma07g00150 304 Gene3D - 1 114 IPR037062 GO:0004471
Gma07g00150 304 PRINTS Malic enzyme signature 3 32 IPR001891 GO:0004470|GO:0004471
Gma07g00150 304 PRINTS Malic enzyme signature 39 61 IPR001891 GO:0004470|GO:0004471
Gma07g00150 304 PANTHER NADP-DEPENDENT MALIC ENZYME 4, CHLOROPLASTIC 1 260 - -
Gma07g00150 304 SMART malic_2 1 107 IPR012301 GO:0004471
Gma07g00150 304 Pfam Malic enzyme, NAD binding domain 117 248 IPR012302 GO:0051287
Gma07g00150 304 PIRSF ME 1 250 IPR001891 GO:0004470|GO:0004471
Gma07g00150 304 ProSitePatterns Malic enzymes signature. 113 129 IPR015884 GO:0004471
Gma07g00150 304 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 117 248 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00150 Gma-Chr7 1273785 1276303 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00150 K00029 - gmx:100785718 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00150 07 1273785 1276303 Gma08g01846 08 16573003 16578513 GST
Gma13g03176 13 45899324 45905038 Gma07g00150 07 1273785 1276303 PCT
Gma15g00189 15 1515642 1521470 Gma07g00150 07 1273785 1276303 PCT
Gma07g00150 07 1273785 1276303 Gma13g03176 13 45899324 45905038 PCT
Gma07g00150 07 1273785 1276303 Gma15g00189 15 1515642 1521470 PCT