Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00784 ATGATGTGGCTCAATAGGCACAGGCACAACATTAATATTCTGCTACCACCTACAAAAGGACTAGTACAAAAGTTGTTGGCAGTGACCATGTCGAGCACTTCGTTGAAGGAGATGAGGAACGGTGGTGAGGATTATAGCAATGGTCATGGTGGTGGTGTAAGGGACTTGTATGGAGAGGATTGTGCCACAGAGGACCAGCTTATCACCCCATGGACTTTCTCTGTGGCCAGTGGATGCAGTTTGCTGAGAGATCCACGCTACAACAAAGGACTGGCCTTTACTGAGGGAGAGAGAGATGCTCATTACTTGCGTGGCCTTTTGCCTCCAGCTGTCTTCAATCAAGAACTTCAGGAAAAGAGGTTGATGCACAATCTTCGCCAGTATGAGGTTCCTCTACATAGGTACATGGCCATGATGGATCTTCAGGAGAGGAATGAAAGGCTGTTTTACAAGCTTCTGATCGATAATGTTGAGGAACTGCTTCCTGTTGTTTACACTCCAACTGTTGGAGAAGCATGCCAGAAATACGGAAGTATTTTTAGGCGTCCTCAGGGTCTATATATCAGTTTGAAGGAGAAAGGCAAGATCCTTGAAGTACTGAAAAACTGGCCAGAAAAGAGTATTCAAGTTATTGTTGTGACTGATGGTGAGCGTATATTAGGACTTGGAGATCTTGGTTGCCAGGGTATGGGAATTCCTGTTGGGAAACTTTCTCTCTATACGGCTTTAGGAGGTGTCCGCCCTTCATCTTGCTTGCCAATAACCATTGATGTTGGCACAAACAATGAGAAGTTGCTGAATGATGAGTTTTACATTGGACTTAAACAAAAGCGGGCAACTGGGCAGGAATATGCGGAGCTTCTAGAGGAGTTCATGCGCGCAGTTAAGCAGAATTATGGGGAGAAAGTTCTCGTACAGTTTGAGGATTTCGCCAATCATAATGCATTTGATCTGCTGGAAAAATACAGCTCATCTCATCTTGTTTTCAACGATGATATACAGGGTACAGCATCTGTGGTATTAGCAGGATTGCTTGCATCCCTGAAATTAGTTGGGGGGACCTTAGCTGACCATACCTTCTTATTCCTGGGTGCTGGAGAGGCTGGAACTGGTATAGCTGAGCTGATAGCTCTTGAGATTTCAAAGCAGACTAAAGCTCCAGTGGAAAAGACCCGCAAGAAGATATGGCTCGTGGACTCAAAGGGACTTATTGTTAGCTCTCGATTGGAATCACTTCAGCACTTCAAAAAGCCTTGGGCCCATGAGCATGAACCTGTTAAGACTCTTCTAGATGCCGTCAAGGCAATCAAGCCAACCGTTTTGATTGGATCATCTGGAGCAGGGAAGACATTTACCAAGGAGGTGGTTGAAACCATGGCATCCCTGAATGAGAAACCACTCATTCTTGCTCTCTCCAACCCAACTTCACAATCTGAGTGCACGGCTGAAGAAGCTTATACATGGAGCAAGGGTAAAGCAATCTTTGCTAGTGGAAGCCCATTTGATCCTGTTGAATATGAAGGAAAAGTTTTTGTTCCTGGACAGGCCAACAATGCTTACATATTTCCTGGTTTTGGCTTGGGTTTGATCATTTCTGGTGCAATCCGCGTGCGTGATGAGATGCTCTTGGCAGCCTCTGAAGCTTTGGCTGCACAAGTATCACAGGAGAACTATGATAAGGGGCTGATTTACCCTCCATTCTCAAACATCAGAAAGATATCAGCCCACATTGCTGCTAAAGTCGCAACTAAGGCATATGATCTAGGTCTGGCTTCTCATCTGCCTCGACCTAAGGATCTTGTCAAATATGCAGAAAGTTGCATGTACAGCCCAGGCTACCGTAGCTACCGTTGA 1854 0.4536 MMWLNRHRHNINILLPPTKGLVQKLLAVTMSSTSLKEMRNGGEDYSNGHGGGVRDLYGEDCATEDQLITPWTFSVASGCSLLRDPRYNKGLAFTEGERDAHYLRGLLPPAVFNQELQEKRLMHNLRQYEVPLHRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLKQKRATGQEYAELLEEFMRAVKQNYGEKVLVQFEDFANHNAFDLLEKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGEAGTGIAELIALEISKQTKAPVEKTRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKTLLDAVKAIKPTVLIGSSGAGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGKAIFASGSPFDPVEYEGKVFVPGQANNAYIFPGFGLGLIISGAIRVRDEMLLAASEALAAQVSQENYDKGLIYPPFSNIRKISAHIAAKVATKAYDLGLASHLPRPKDLVKYAESCMYSPGYRSYR 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00784 617 CDD NAD_bind_1_malic_enz 333 611 - -
Gma04g00784 617 Gene3D - 331 617 - -
Gma04g00784 617 SMART Malic_M_2 333 586 IPR012302 GO:0051287
Gma04g00784 617 Gene3D - 76 330 IPR037062 GO:0004471
Gma04g00784 617 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 56 332 IPR046346 -
Gma04g00784 617 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 333 616 IPR036291 -
Gma04g00784 617 SMART malic_2 142 323 IPR012301 GO:0004471
Gma04g00784 617 PRINTS Malic enzyme signature 148 172 IPR001891 GO:0004470|GO:0004471
Gma04g00784 617 PRINTS Malic enzyme signature 208 237 IPR001891 GO:0004470|GO:0004471
Gma04g00784 617 PRINTS Malic enzyme signature 244 266 IPR001891 GO:0004470|GO:0004471
Gma04g00784 617 PRINTS Malic enzyme signature 304 322 IPR001891 GO:0004470|GO:0004471
Gma04g00784 617 PRINTS Malic enzyme signature 329 345 IPR001891 GO:0004470|GO:0004471
Gma04g00784 617 PRINTS Malic enzyme signature 360 376 IPR001891 GO:0004470|GO:0004471
Gma04g00784 617 PRINTS Malic enzyme signature 463 479 IPR001891 GO:0004470|GO:0004471
Gma04g00784 617 PANTHER MALIC ENZYME 41 617 - -
Gma04g00784 617 PANTHER MALIC ENZYME-RELATED 41 617 - -
Gma04g00784 617 ProSitePatterns Malic enzymes signature. 329 345 IPR015884 GO:0004471
Gma04g00784 617 PIRSF ME 32 617 IPR001891 GO:0004470|GO:0004471
Gma04g00784 617 Pfam Malic enzyme, N-terminal domain 142 322 IPR012301 GO:0004471
Gma04g00784 617 Pfam Malic enzyme, NAD binding domain 333 586 IPR012302 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00784 Gma-Chr4 7440357 7445425 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00784 K00029 - gmx:100801564 1177.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00784 04 7440357 7445425 Gma04g00784 04 7440357 7445425 ECH
Gma04g00784 04 7440357 7445425 Gma06g00777 06 7047642 7052919 ECH
Gma08g00328 08 2783868 2788254 Gma04g00784 04 7440357 7445425 ECH
Gma05g02212 05 43207160 43212678 Gma04g00784 04 7440357 7445425 ECH
Gma15g00189 15 1515642 1521470 Gma04g00784 04 7440357 7445425 ECH
Gma08g01846 08 16573003 16578513 Gma04g00784 04 7440357 7445425 ECH
Gma13g03176 13 45899324 45905038 Gma04g00784 04 7440357 7445425 ECH
Gma04g00784 04 7440357 7445425 Gma06g00777 06 7047642 7052919 GST