Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g00777 ATGATGTGGCTCAACAGGCGCAGGCACAACATTAATACTCTGCAACTACCTACAAAAGGAGGACTAGGACAAAAGTTGTTGGCAGTCATCATGTCGAGCGCTTCGTTGAAGGAGATGAGGAACGGTGGTGAGGATTATAGCAATGGTCATGGTGGTGGTGGTGTGAGGGACTTGTATGGAGAGGATTGTGCCACTGAGGACCAGCTTATCACTCCATGGACTTTCTCTGTGGCCAGTGGATGCAGTTTACTGAGAGATCCACGCTACAACAAAGGGCTGGCCTTTACCGAGGGAGAGAGAGATGCTCATTACTTGCGTGGCCTTTTGCCTCCAGCTATCTTCAATCAAGAACTTCAGGAAAAGAGGTTGATGCACAATCTTCGCCAGTATGAGGTTCCTCTGCATAGGTACATGGCAATGATGGATCTTCAGgagagaaatgaaaggctgttttacaagcttctgatcaataatgttgaggaactgcttcctgttgtttacactccaactgttggagaagcatgccagaaatacggaagcatttttaggcgtcctcagggtctatatataagtttgaaggagaaaggcaagatccttgaagtactgaaaaactggccagaaaagagtattcaagttattgttgtgactgatggtgagcgcatattaggacttggagatcttggttgccagggaatgggaattcctgttgggaaactttctctttatacagctttaggaggtgtccgcccgtcatctTGCTTGCCAATAACCATTGATGTTGGCACAAACAATGAGAAGTTGCTGAATGATGAGTTCTACATTGGGCTTAAACAAAAGCGGGCAACTGGGCAGGAATATGCAGAGCTTCTAGAGGAGTTCATGCACGCAGTTAAGCAGAACTATGGGGAGAAAGTTCTCATACAGTTTGAGGATTTCGCCAATCATAATGCATTTGATCTGCTGGAAAAATACAGCTCATCTCATCTTGTTTTTAATGATGATATACAGGGTACAGCATCTGTGGTATTAGCAGGATTGCTTGCATCCCTGAAATTAGTTGGTGGAACCTTAGTTGACCATACCTTCTTATTCCTGGGTGCTGGAGAGGCTGGAACTGGTATAGCTGAGCTGATAGCTCTTGAGATTTCAAAGCAGACTAAAGCTCCAGTGGAAGAGACCCGCAAGAAGATCTGGCTCGTGGACTCAAAGGGACTTATTGTTAGCTCTCGTTTGGAATCACTTCAGCAGTTCAAAAAGCCTTGGGCCCATGAGCATGAACCTGTTAAGAGTCTTCTGGATGCTGTCAAGGCAATCAAGCCAACCGTTTTGATTGGATCATCTGGAGCAGGGAAGACATTTACTAAGGAGGTGGTTGAAACCATGGCATCCTTGAATGAGAAACCACTTATTCTTGCTCTCTCCAATCCAACTTCGCAATCTGAGTGCACAGCTGAAGAAGCTTATACATGGAGCAAGGGTAAAGCAATCTTTGCTAGTGGAAGCCCATTTGATCCTGTTGAATATGAAGGAAAACTTTTTGTTCCTGGACAGGCCAACAATGCTTACATATTTCCTGGTTTTGGCTTGGGTTTGATCATCTCTGGTGCAATTCGTGTGCGTGATGAGATGCTCTTGGCAGCCTCTGAAGCTTTGGCTGCACAAGTATCACAGGAGAACTATGATAAGGGACTGATTTACCCTCCATTCTCAAACATCAGAAAGATATCAGCCCACATTGCTGCTAAAGTCGCGGCTAAGGCATATGATCTTGGTCTAGCTTCTCATCTGCCTCGACCTAAGGATCTTGTCAAATATGCAGAAAGTTGCATGTACAGCCCAGGCTACCGAAGCTACCGTTGA 1860 0.3769 MMWLNRRRHNINTLQLPTKGGLGQKLLAVIMSSASLKEMRNGGEDYSNGHGGGGVRDLYGEDCATEDQLITPWTFSVASGCSLLRDPRYNKGLAFTEGERDAHYLRGLLPPAIFNQELQEKRLMHNLRQYEVPLHRYMAMMDLQERNERLFYKLLINNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLKQKRATGQEYAELLEEFMHAVKQNYGEKVLIQFEDFANHNAFDLLEKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLVDHTFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIWLVDSKGLIVSSRLESLQQFKKPWAHEHEPVKSLLDAVKAIKPTVLIGSSGAGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGKAIFASGSPFDPVEYEGKLFVPGQANNAYIFPGFGLGLIISGAIRVRDEMLLAASEALAAQVSQENYDKGLIYPPFSNIRKISAHIAAKVAAKAYDLGLASHLPRPKDLVKYAESCMYSPGYRSYR 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g00777 619 Gene3D - 78 332 IPR037062 GO:0004471
Gma06g00777 619 PRINTS Malic enzyme signature 150 174 IPR001891 GO:0004470|GO:0004471
Gma06g00777 619 PRINTS Malic enzyme signature 210 239 IPR001891 GO:0004470|GO:0004471
Gma06g00777 619 PRINTS Malic enzyme signature 246 268 IPR001891 GO:0004470|GO:0004471
Gma06g00777 619 PRINTS Malic enzyme signature 306 324 IPR001891 GO:0004470|GO:0004471
Gma06g00777 619 PRINTS Malic enzyme signature 331 347 IPR001891 GO:0004470|GO:0004471
Gma06g00777 619 PRINTS Malic enzyme signature 362 378 IPR001891 GO:0004470|GO:0004471
Gma06g00777 619 PRINTS Malic enzyme signature 465 481 IPR001891 GO:0004470|GO:0004471
Gma06g00777 619 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 58 334 IPR046346 -
Gma06g00777 619 ProSitePatterns Malic enzymes signature. 331 347 IPR015884 GO:0004471
Gma06g00777 619 SMART malic_2 144 325 IPR012301 GO:0004471
Gma06g00777 619 PANTHER MALIC ENZYME 33 619 - -
Gma06g00777 619 PANTHER MALIC ENZYME-RELATED 33 619 - -
Gma06g00777 619 CDD NAD_bind_1_malic_enz 335 613 - -
Gma06g00777 619 Pfam Malic enzyme, NAD binding domain 335 587 IPR012302 GO:0051287
Gma06g00777 619 Gene3D - 333 619 - -
Gma06g00777 619 Pfam Malic enzyme, N-terminal domain 144 324 IPR012301 GO:0004471
Gma06g00777 619 PIRSF ME 40 619 IPR001891 GO:0004470|GO:0004471
Gma06g00777 619 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 335 618 IPR036291 -
Gma06g00777 619 SMART Malic_M_2 335 588 IPR012302 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g00777 Gma-Chr6 7047642 7052919 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g00777 K00029 - gmx:100801564 1206.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g00777 06 7047642 7052919 Gma06g00777 06 7047642 7052919 ECH
Gma04g00784 04 7440357 7445425 Gma06g00777 06 7047642 7052919 ECH
Gma08g00328 08 2783868 2788254 Gma06g00777 06 7047642 7052919 ECH
Gma05g02212 05 43207160 43212678 Gma06g00777 06 7047642 7052919 ECH
Gma15g00189 15 1515642 1521470 Gma06g00777 06 7047642 7052919 ECH
Gma08g01846 08 16573003 16578513 Gma06g00777 06 7047642 7052919 ECH
Gma13g03176 13 45899324 45905038 Gma06g00777 06 7047642 7052919 ECH
Gma04g00784 04 7440357 7445425 Gma06g00777 06 7047642 7052919 GST