Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0559 ATGGACTTCGAATCAAGCTACGATATTTCCGCCACTGCAGACTTCATCCACAGCCGCAACTTCACCAGAGTTGCTTTGCAAGTAAGACCTACTCCTTCAATTCTCCAGTTTGTTACTGCTCACGATAAAAGTTCACATCTTTATATCCGCAATCAGAACATATCAATAGAAATCATTATTTTGAAAAGCCCAATCGTGCAGAGTATAACTGTAAAAATACTCAACTTCTGCAGCTATAATGACTTTCTTTTTTTAATCTCTCAGTTTCCAGATAATCTCCTAAAAGACTCAACGAAAGTGGTAGCAGCATTAAACCAACGTCTTCAATCACTTAGAGAAATTGATGTCACAGGAACTGTGAATACGGCAGATGTAGGGTTGTACGTGATGGCAGACACAACGTATGGTAGTTGCTGTGTCGATGAAGTTGCAGCATTACACGTCAATGCTGATTGTGTCATTCATTATGGACAGACATGTTTTAGCCCGACAACAAGTCTACCAGCTTTCTTTGTTTTCGGGAAGGCTTCCATTAGCGTAGCTAACTGTGTTGAAAGTCTATCGAAATATGCTCTTTCATGTAGCAAGCCTATCATGGTCCTTTTTGGGTTGGAATACGCACATTCAATACAGCACATTAAAACAACAATATTAGAAGCATTGAAGTCAAGTAGATCTGAGTCAGAAGTTCATTTTGCCGATGTTCCATTGTCATTTATGTTTCCATCAAAAGATATCAAAAACTTAAATGGGCTGCAGGAACCAGCTAATGGTTTGACCAATAATGTCAGTTCTAATGAGACTAGTGGACCTAGGTATAGCATTGGAGGATTGACTTGGAAATTACCTGAGGGAAAAAGCATGGATGACTTCTTGATCTTTTGGATTGGTCTTGATAATTCAGCATTTGCAAATGTTGTGCTTACATTCAATGCCTGTGAAATAGTCAGATATGATGCAATTGAAAACCGAATGGTATCTGACTTGTCTCAACAGAGGAGGATTCTTAAACGTAGATATTACTTAGTTGAGAGGGCTAAAGATGCAAATATCATTGGGATTTTGGTTGGAACTCTTGGTGTAGCGGGTTATCTTCACATGATACATCAGATGAAAGAACTCATTACTGGAGCAGGAAAGAAGTCCTACACTTTGGTCATGGGAAGACCAAACCCAGCTAAACTTGCTAACTTTCCTGAGTTTGATTTTCATCAGTGTGATGTTTTCATTTATGTCTCCTGTGCTCAAACTGCTCTGCTGGATAGCAAAGAGTATCTAGCCCCAGTTATTACTCCATTTGAAGCAACAATAGCTTTCAGCAGGGGAAGCCAATGGACAGGATCATATCTAATGCAATTTCGAGATCTAATAGAATTGCCTCAAGTGGAAGCTGGAAACCAGGAAGAAGCACGGTTTTCGTTCCTGCGGGGTGGATATGTGGAAGATAATGATAGCCATGAAAATGCCAAAGACGATCAAGAAGTCCTTGCTTTAGTTAATGCTACAGAGAAGGCATTGCAATTGAGGGATAACTGTGGTTCTCTAATTAAAAGGGATGCTAAATCAGGAGCAGAGTTTTTCTCCACAAGATCTTATCAGGGTCTGAATATCGACAATGAAAACGCCGTACCCGAGCCGTATTTCATAGGAAGGAAAGGAAGGGCGTCAGGCTATGAAGACGAGAAAAGCCAGTAA 1695 0.4012 MDFESSYDISATADFIHSRNFTRVALQVRPTPSILQFVTAHDKSSHLYIRNQNISIEIIILKSPIVQSITVKILNFCSYNDFLFLISQFPDNLLKDSTKVVAALNQRLQSLREIDVTGTVNTADVGLYVMADTTYGSCCVDEVAALHVNADCVIHYGQTCFSPTTSLPAFFVFGKASISVANCVESLSKYALSCSKPIMVLFGLEYAHSIQHIKTTILEALKSSRSESEVHFADVPLSFMFPSKDIKNLNGLQEPANGLTNNVSSNETSGPRYSIGGLTWKLPEGKSMDDFLIFWIGLDNSAFANVVLTFNACEIVRYDAIENRMVSDLSQQRRILKRRYYLVERAKDANIIGILVGTLGVAGYLHMIHQMKELITGAGKKSYTLVMGRPNPAKLANFPEFDFHQCDVFIYVSCAQTALLDSKEYLAPVITPFEATIAFSRGSQWTGSYLMQFRDLIELPQVEAGNQEEARFSFLRGGYVEDNDSHENAKDDQEVLALVNATEKALQLRDNCGSLIKRDAKSGAEFFSTRSYQGLNIDNENAVPEPYFIGRKGRASGYEDEKSQ 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0559 564 TIGRFAM DPH2: diphthamide biosynthesis protein 2 87 559 IPR010014 GO:0017183
Lele44g0559 564 Coils Coil 94 114 - -
Lele44g0559 564 TIGRFAM diphth2_R: diphthamide biosynthesis enzyme Dph1/Dph2 domain 88 439 IPR016435 GO:0017183|GO:0090560
Lele44g0559 564 Pfam Putative diphthamide synthesis protein 89 449 IPR016435 GO:0017183|GO:0090560
Lele44g0559 564 Gene3D Diphthamide synthesis DPH1/DPH2 domain 3 332 439 IPR042265 -
Lele44g0559 564 FunFam 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 332 439 - -
Lele44g0559 564 SFLD Diphthamide biosynthesis 88 563 - -
Lele44g0559 564 SFLD Radical SAM 3-amino-3-carboxypropyl Radical Forming 88 562 IPR016435 GO:0017183|GO:0090560
Lele44g0559 564 Gene3D Diphthamide synthesis DPH1/DPH2 domain 1 71 177 IPR042263 -
Lele44g0559 564 PANTHER DIPHTHAMIDE BIOSYNTHESIS PROTEIN 88 561 IPR016435 GO:0017183|GO:0090560
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0559 Lele-ChrLele44 4361751 4365868 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g0559 44 4361751 4365868 Lele37g0501 37 4092566 4094507 CCT
Lele44g0559 44 4361751 4365868 Lele38g0470 38 3793219 3795004 CCT
Lele44g0559 44 4361751 4365868 Lele39g0924 39 18182903 18184375 CCT
Lele44g0559 44 4361751 4365868 Lele40g0441 40 3650330 3651327 CCT
Lele41g0795 41 17714831 17718471 Lele44g0559 44 4361751 4365868 hybridization
Lele42g0781 42 20791106 20795251 Lele44g0559 44 4361751 4365868 hybridization