Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0470 ATGGTACGCAGTAAAACTTTTTCAACACAAGTTTGGGAAGATGAAGAAAAAGGCGATGAAGAATTGTTGACGTGCAAGCACAACAATTTTAGCAAGGCGATGGGTGGCAGGACCATGTCTAAATTAGGTTGTTTTCGAATACCGGACAAGACGGGGGTTCCGGTGTGGCAGCTCGGGTTGGGTGGGGACCGGCTGTGGGCCGACATGAACCGCCTGCTCTCCTTCCTCTTCCATCAACAAGTTCTCGACGAACAGTTCTTGCAGCTTCACCAACTCCAAGATCACTCTTCTCCCTACTTCGTCTCCGAAGTTTTCTCCATCTACTTCCACGAGTCCGAGAAGCTCCTCTCCTCTCTCCGATCTCTTCTGATGGACAAGGAGTTATCAGACTTGAAGAAAATGAGAATACATTTGAATCAGTTGATGGGTAGCAGCTCCAGCATCGGAGCCAAGAGAATCGGAAACGTCTGTCTTGCCTTTCGTGCTTCTATTCGCCTCAACAACCGCCCTGGATGCTGGAGAGCTATGGAGATGCTGGAGCAGGAGTATTGCTATCTCAAGAACAAGTTACACGAGTTATTCCAGATAGAGCAGCAACGCGTTTTGGCAGCGAGAGTGAGATACCCAGCAGGTGGTGCAGGATAA 645 0.4915 MVRSKTFSTQVWEDEEKGDEELLTCKHNNFSKAMGGRTMSKLGCFRIPDKTGVPVWQLGLGGDRLWADMNRLLSFLFHQQVLDEQFLQLHQLQDHSSPYFVSEVFSIYFHESEKLLSSLRSLLMDKELSDLKKMRIHLNQLMGSSSSIGAKRIGNVCLAFRASIRLNNRPGCWRAMEMLEQEYCYLKNKLHELFQIEQQRVLAARVRYPAGGAG 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0470 214 FunFam Histidine-containing phosphotransfer protein 1 61 209 - -
Lele38g0470 214 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 97 193 IPR008207 GO:0000160
Lele38g0470 214 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 66 199 IPR045871 GO:0000160|GO:0009927|GO:0043424
Lele38g0470 214 Pfam Hpt domain 104 182 IPR008207 GO:0000160
Lele38g0470 214 Gene3D HPT domain 60 210 IPR036641 GO:0000160
Lele38g0470 214 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 65 199 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0470 Lele-ChrLele38 3793219 3795004 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g0605 43 5404211 5410412 Lele38g0470 38 3793219 3795004 CCT
Lele44g0559 44 4361751 4365868 Lele38g0470 38 3793219 3795004 CCT
Lele38g0470 38 3793219 3795004 Lele38g0470 38 3793219 3795004 ECH
Lele38g0470 38 3793219 3795004 Lele39g0924 39 18182903 18184375 hybridization
Lele38g0470 38 3793219 3795004 Lele40g0441 40 3650330 3651327 hybridization