Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0441 ATGAACCGCCTGCTCTCCTTCCTCTTCCATCAACAAGTTCTCGACGAACAGTTCTTGCAGCTTCACCAACTCCAAGATCACTCTTATCCCTACTTCATCTCCGAAGTTTTCTCCATCTACTTCCACGAGTCCGAGAAGCTCCTCTCCTCTCTCCGATCTCTTCTAATGGACAAGGAGTTATCAGACTTGAAGCAAATGAGAATACATTTGAATCAGTTGATGGGTAGCAGCTCCAGCATCGGAGCCAAGAGAATTCGAAACGTCTGTCTTTCCTTTCGTGCTTCTATTCGCCTCAACAACCGCCCTGGGTGTTGGAGAGCTATGGAGATGCTGGAGCAGGAGTATTGCTATCTCAAGAACAAGTTACACGAGTTATTCCAGATAGAGCAGCAACGCGTTTTGGCAGCAAGAGTGAGATACCCAGCAGGTGGTGCGGGATAA 441 0.4785 MNRLLSFLFHQQVLDEQFLQLHQLQDHSYPYFISEVFSIYFHESEKLLSSLRSLLMDKELSDLKQMRIHLNQLMGSSSSIGAKRIRNVCLSFRASIRLNNRPGCWRAMEMLEQEYCYLKNKLHELFQIEQQRVLAARVRYPAGGAG 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0441 146 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 1 131 IPR045871 GO:0000160|GO:0009927|GO:0043424
Lele40g0441 146 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 29 125 IPR008207 GO:0000160
Lele40g0441 146 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 5 131 IPR036641 GO:0000160
Lele40g0441 146 Gene3D HPT domain 1 142 IPR036641 GO:0000160
Lele40g0441 146 FunFam Histidine-containing phosphotransfer protein 1 1 141 - -
Lele40g0441 146 Pfam Hpt domain 36 114 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0441 Lele-ChrLele40 3650330 3651327 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g0605 43 5404211 5410412 Lele40g0441 40 3650330 3651327 CCT
Lele44g0559 44 4361751 4365868 Lele40g0441 40 3650330 3651327 CCT
Lele40g0441 40 3650330 3651327 Lele40g0441 40 3650330 3651327 ECH
Lele37g0501 37 4092566 4094507 Lele40g0441 40 3650330 3651327 hybridization
Lele38g0470 38 3793219 3795004 Lele40g0441 40 3650330 3651327 hybridization