Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0924 ATGGGCAGGCACAACAATTTTAGCAAGGGGATGGGTGGCAGGACCATGTCTAAATTAAGTAAGCTCGGGTTGGGTGGGGACCGGCTGTGGTCCGACATGAACCGCCTCCTCTCCTTCCTCTTCCATCAACAAGTCCTCGACGAACAGTTCTTACAGCTTCACCAACTCCAAGACCACTCCTCTCCCTACTTCGTCTCCGAAGTTTTCTCCATCTACTTCCACGAGTCGGAGAAGCTCCTCTCCTCTCTCCGATCTCTTCTAATGGATAAGGAGTTATCAGACTTGAAGAAAATGTTAATACCTTTGAATCAGTTGATGGGTAGCAGCTCCAGCATCGGAGCCAAGAGAATCCGAAACGTCTGTCTCGCATTTCGTGCTTCTATTGGCCTCAACAACCGCCCTGGATGCTGGAGAGCTATGGAGATGCTGGAGCAGGAGTATTGCTATCTGAAGAACAAGTTACACGAGTTATTCCAGATAGAGCAGCAACGACTCTTAGCAGCAGGAGTGAGATACCCAGCTGGTGCACAATAA 534 0.4944 MGRHNNFSKGMGGRTMSKLSKLGLGGDRLWSDMNRLLSFLFHQQVLDEQFLQLHQLQDHSSPYFVSEVFSIYFHESEKLLSSLRSLLMDKELSDLKKMLIPLNQLMGSSSSIGAKRIRNVCLAFRASIGLNNRPGCWRAMEMLEQEYCYLKNKLHELFQIEQQRLLAAGVRYPAGAQ 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0924 177 FunFam Histidine-containing phosphotransfer protein 1 25 173 - -
Lele39g0924 177 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 31 163 IPR045871 GO:0000160|GO:0009927|GO:0043424
Lele39g0924 177 Gene3D HPT domain 24 174 IPR036641 GO:0000160
Lele39g0924 177 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 30 163 IPR036641 GO:0000160
Lele39g0924 177 Pfam Hpt domain 68 146 IPR008207 GO:0000160
Lele39g0924 177 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 61 157 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0924 Lele-ChrLele39 18182903 18184375 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g0605 43 5404211 5410412 Lele39g0924 39 18182903 18184375 CCT
Lele44g0559 44 4361751 4365868 Lele39g0924 39 18182903 18184375 CCT
Lele39g0924 39 18182903 18184375 Lele39g0924 39 18182903 18184375 ECH
Lele37g0501 37 4092566 4094507 Lele39g0924 39 18182903 18184375 hybridization
Lele38g0470 38 3793219 3795004 Lele39g0924 39 18182903 18184375 hybridization