Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0501 ATGTGCAGGCACAACAATTTTAGCAAGGCGATGGGTGGCAGGACCATGTCTAAATTAAGTAAGACGGGGGTTCCGGAGTGGCAGCTCGGGTTGGGTGGGGACCGGCTGTGGGCTGACATGAGCCGCCTCCTCTCCTTCCTCTTCCATCAACAAGTCCTCGACGAACAGTTCTTACAGCTTCACCAACTCCAAGACCACTCCTCTCCCTACTTCATCTCCGAAGTTTTCTCCATTTACTTCCACGAGTCTGAGAAGCTCCTCTCCTCTCTCCGATCTCTTCTAATGGATAAGGAGTTATCAGACTTGAAGAAAATGTTAATACATTTGAATCAGTTGGTGGGTAGCAGCTCCAGCATCGGAGCCAAGAGAATCCGAAACGTCTGTCTTGCCTTTGGTGCTTCTATTCGCCTCAACAACCGCCCTGGATGCTGGAGATCTATGGAGATGCTGGAGCAGGAGTATTGCTATCTGAAGAACAAGTTACACGAGTTATTCCAGATAGAGCAGCAACGCGTTTTAGCGGCAGGAGTGAGATACCCAGCTGGTGCAGAATAA 555 0.4973 MCRHNNFSKAMGGRTMSKLSKTGVPEWQLGLGGDRLWADMSRLLSFLFHQQVLDEQFLQLHQLQDHSSPYFISEVFSIYFHESEKLLSSLRSLLMDKELSDLKKMLIHLNQLVGSSSSIGAKRIRNVCLAFGASIRLNNRPGCWRSMEMLEQEYCYLKNKLHELFQIEQQRVLAAGVRYPAGAE 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0501 184 Pfam Hpt domain 75 153 IPR008207 GO:0000160
Lele37g0501 184 Gene3D HPT domain 32 181 IPR036641 GO:0000160
Lele37g0501 184 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 37 170 IPR036641 GO:0000160
Lele37g0501 184 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 37 170 IPR045871 GO:0000160|GO:0009927|GO:0043424
Lele37g0501 184 FunFam Histidine-containing phosphotransfer protein 1 32 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0501 Lele-ChrLele37 4092566 4094507 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g0605 43 5404211 5410412 Lele37g0501 37 4092566 4094507 CCT
Lele44g0559 44 4361751 4365868 Lele37g0501 37 4092566 4094507 CCT
Lele37g0501 37 4092566 4094507 Lele37g0501 37 4092566 4094507 ECH
Lele37g0501 37 4092566 4094507 Lele39g0924 39 18182903 18184375 hybridization
Lele37g0501 37 4092566 4094507 Lele40g0441 40 3650330 3651327 hybridization