Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0781 ATGGACTTCGAATCAAGCTACGATATTTCCGCCACTGCAGACTTCATCCACAGCCGCAACTTCACCAGAGTTGCTTTGCAATTTCCAGATAATCTCCTAAAAGACTCAACGAAAGTGGTAGCAGCATTAAACCAACGTCTTCAATCACTTAGAGAAATTGATGTCACAGGAAGTGTGAATACGGTAGATGTAGGGTTGTACGTGATGGCAGACACAACGTATGGTAGTTGCTGTGTCGATGAAGTTGCAGCATTACACGTTAATGCTGATTGTGTCATTCATTATGGACAGACATGTTTTAGCCCGACAACAAGTCTACCAGCTTTCTTTGTTTTCGGGAAGGCTTCCATTAGCGTAGCTAACTGTGTTGAAAGTCTATCGAAATATGCTCTTTCATGTAGCAAGCCTATCATGGTCCTTTTTGGGTTGGAATACGCACATTCAATACAACACATTAAAACAGCAATATTAGAAGCATTGAAGTCAAGTAGATCTGAGTCAGAAGTTCATTTTGCCGATGTTCCATTGTCATTTATGTTTCCATCAAAAGATATCAAAAACTTAATTGGGCTACAGGAACCAGCTAATGGTTTGACCAATAATGTCAGTTCTAATGAGACTAGTGGACCTAGGTATAGCATTGGAGGATTGACTTGGAAATTACCTGAGGGAAAAAGCATGGATGACTTCTTGATCTTTTGGATTGGTCTTGATAATTCAGCATTTGCAAATGTTGTGCTCACATTCAATGCCTGTGAAATAGTCAGATATGATGCAACTGAAAACCGAATGGTGACTGACTTGTCTCAACAGAGGAGGATTCTTAAACGTAGATATTACCTAGTCGAGAGGGCTAAAGATGCAAATATCATTGGGATTTTGGTCGGAACTCTTGGTGTAGCGGGTTATCTTCACATGATACATCAGATGAAAGAACTCATTACTGGAGCAGGAAAGAAGTCCTACACTTTGGTCATGGGAAGACCAAACCCAGCTAAACTTGCTAACTTTCCTGAGTGTGATATTTTCATTTATGTCTCCTGTGCTCAAACTGCTCTGCTGGATAGCAAAGAGTACCTAGCCCCAGTTATTACTCCATTTGAAGCAACAATTGCTTTCAGCAGGGGAAGCCAATGGACAGGATCATATCTAATGCAATTTCGAGATCTAATAGAATTGCCTCAAGTGGAAGCTGGAAACCAGGAAGAAGCACGGTTTTCGTTCCTGCGGGGTGGATATGTGGAAGATAATGATAACCATGAAAACGCCAAAGACGATCAAGAAGTCCTTGCTTTAGTTAATGCTACAGAGAAGGCATTGCAATTGAGGGATAACTGTGGTTCTCTAATTAAAAGGGATGCTAAATCAGGAGCAGAGTTTTTCGCCACAAGATCTTATCAGGGTCTGAATATCGACAATGAAAATGCCGTACCCGAGCCGTATTTCATAGGAAGGAAAGGAAGGGCTTCAGGCTATGAAGACGAGAAAAGCCCACAAGAAACTTAA 1506 0.4117 MDFESSYDISATADFIHSRNFTRVALQFPDNLLKDSTKVVAALNQRLQSLREIDVTGSVNTVDVGLYVMADTTYGSCCVDEVAALHVNADCVIHYGQTCFSPTTSLPAFFVFGKASISVANCVESLSKYALSCSKPIMVLFGLEYAHSIQHIKTAILEALKSSRSESEVHFADVPLSFMFPSKDIKNLIGLQEPANGLTNNVSSNETSGPRYSIGGLTWKLPEGKSMDDFLIFWIGLDNSAFANVVLTFNACEIVRYDATENRMVTDLSQQRRILKRRYYLVERAKDANIIGILVGTLGVAGYLHMIHQMKELITGAGKKSYTLVMGRPNPAKLANFPECDIFIYVSCAQTALLDSKEYLAPVITPFEATIAFSRGSQWTGSYLMQFRDLIELPQVEAGNQEEARFSFLRGGYVEDNDNHENAKDDQEVLALVNATEKALQLRDNCGSLIKRDAKSGAEFFATRSYQGLNIDNENAVPEPYFIGRKGRASGYEDEKSPQET 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0781 501 SFLD Diphthamide biosynthesis 2 497 - -
Lele42g0781 501 PANTHER DIPHTHAMIDE BIOSYNTHESIS PROTEIN 1 495 IPR016435 GO:0017183|GO:0090560
Lele42g0781 501 FunFam 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 271 373 - -
Lele42g0781 501 TIGRFAM DPH2: diphthamide biosynthesis protein 2 2 493 IPR010014 GO:0017183
Lele42g0781 501 TIGRFAM diphth2_R: diphthamide biosynthesis enzyme Dph1/Dph2 domain 6 373 IPR016435 GO:0017183|GO:0090560
Lele42g0781 501 Gene3D Diphthamide synthesis DPH1/DPH2 domain 3 271 373 IPR042265 -
Lele42g0781 501 Gene3D Diphthamide synthesis DPH1/DPH2 domain 1 9 116 IPR042263 -
Lele42g0781 501 SFLD Radical SAM 3-amino-3-carboxypropyl Radical Forming 3 500 IPR016435 GO:0017183|GO:0090560
Lele42g0781 501 Pfam Putative diphthamide synthesis protein 28 383 IPR016435 GO:0017183|GO:0090560
Lele42g0781 501 Coils Coil 33 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0781 Lele-ChrLele42 20791106 20795251 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0781 42 20791106 20795251 Lele37g0500 37 4080110 4081040 CCT
Lele42g0781 42 20791106 20795251 Lele38g0468 38 3779475 3779795 CCT
Lele42g0781 42 20791106 20795251 Lele39g0925 39 18195775 18196726 CCT
Lele42g0781 42 20791106 20795251 Lele40g0440 40 3640381 3641290 CCT
Lele42g0781 42 20791106 20795251 Lele43g0605 43 5404211 5410412 hybridization
Lele42g0781 42 20791106 20795251 Lele44g0559 44 4361751 4365868 hybridization