Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0795 ATGGACTTTGAATCAAGCTACGATATTTCCGCCACTGCCGACTTCATTCACAGCCGCAACTTCACCAGAGTTGCTTTGCAAGTAAGACCTACTTCTTCAATTCTCCAGTTTGTTTCTGCTCTTGATAAAAGAAGTGTGAATACGATAGATGTAGGCTTGTACGTGATGGCAGACACAACGTATGGGAGTTGCTGTGTTGATGAAGTTGCAGCTTTACACATCAATGCTGATTGTGTCATTCATTATGGGCAGACATGTTTTAGCCCGACAACAACTCTACCTGCTTTCTTTGTTTTTGGAAAGGCTTCTATTAGCATAGATAACTGTGTTGAAAGTCTGTCGAAATATGCTCTTTCATGTAGCAAACCTATGATGGTACTTTTTGGGTTGGAATACGCACGTTCAATACAACACATTAAAACAGCAATGTTAGAAGCATTAATGTCTAGTAGATCTGAGTTGAAATCAGAAGTTCATTTTGCCAATGTTCCATCTTCTTCTATGTTTCCATCAAAAGATATCAAAAACTTAAATGGGCTGCACGAACCAGCTGATGGTTTGCCCAATAATGTCAGTTCTAATGAGACTAGTGGACCTAGGTATAGCATTGGAGGATTCACTTGGAAATTACCCGAGGGAAAAAGCATGGATGACTTCTCAATCTTTTGGATTGGACTCGATAATTCTGCATTTGCAAATGTTGTTCTCACATTCGATGCCTGTGAAATAGGTTGCTTACTTACCCTATGTCAAAAATATTACCTAGTCGAGAGGGCTAAAGATGCAAATATCATTGGTATTTTGGTTGGAACTCTTGGCGTAGATGAAAGAACTCATTACTGGGCAGGAAAGAAGGCCTATACTTCGGTCATGGGAAGACCAAACCCAGCTAAACTTGCTAACTTTCCCGAGTTTGATTTTCATCAGTGTGATGTTTTCATTTTTGTCTCCTGTGCTGAAACTGCTCTACTGGATAGCAAAGAGTATCTAGCCCCAGTTATTACTCGATTTGAAGCAACAATAGCTTTCAGCAGGGGAAGCCAATGGACAGGATCATATCTAATGGAATTTCGAGATCTAATAGAATTGCCTCAAGTGGAATCTGGAAACCAGGAAGAAGCACGGTTTTCATTCCTTCAGGGTGGATATGTGGAAGATACTGATAACCATGAAAACGCCAAGGACGATCAGGAAGCCCTTGCTTTAGTTAATGCTACAGAGAAGGCATTGCAATTGCGGGATAACTGTGGTTCTCTAATTAAAAGGGATGCTAAATCAGGAGCAGAGTTTTTCGCCACAAGATCTTATCAGGGTCTGAATATTGACGATGAAAATGCCGTGCCCGAGCCATATTTCATAGGAAGGAAAGGAAGGGCGTCAGGCTATGTAGACGAGAAAAGCCAACAATAA 1410 0.4085 MDFESSYDISATADFIHSRNFTRVALQVRPTSSILQFVSALDKRSVNTIDVGLYVMADTTYGSCCVDEVAALHINADCVIHYGQTCFSPTTTLPAFFVFGKASISIDNCVESLSKYALSCSKPMMVLFGLEYARSIQHIKTAMLEALMSSRSELKSEVHFANVPSSSMFPSKDIKNLNGLHEPADGLPNNVSSNETSGPRYSIGGFTWKLPEGKSMDDFSIFWIGLDNSAFANVVLTFDACEIGCLLTLCQKYYLVERAKDANIIGILVGTLGVDERTHYWAGKKAYTSVMGRPNPAKLANFPEFDFHQCDVFIFVSCAETALLDSKEYLAPVITRFEATIAFSRGSQWTGSYLMEFRDLIELPQVESGNQEEARFSFLQGGYVEDTDNHENAKDDQEALALVNATEKALQLRDNCGSLIKRDAKSGAEFFATRSYQGLNIDDENAVPEPYFIGRKGRASGYVDEKSQQ 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0795 469 SFLD Radical SAM 3-amino-3-carboxypropyl Radical Forming 3 468 IPR016435 GO:0017183|GO:0090560
Lele41g0795 469 TIGRFAM diphth2_R: diphthamide biosynthesis enzyme Dph1/Dph2 domain 6 343 IPR016435 GO:0017183|GO:0090560
Lele41g0795 469 PANTHER DIPHTHAMIDE BIOSYNTHESIS PROTEIN 1 465 IPR016435 GO:0017183|GO:0090560
Lele41g0795 469 Gene3D Diphthamide synthesis DPH1/DPH2 domain 1 9 103 IPR042263 -
Lele41g0795 469 SFLD Diphthamide biosynthesis 2 467 - -
Lele41g0795 469 FunFam 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 247 343 - -
Lele41g0795 469 Gene3D Diphthamide synthesis DPH1/DPH2 domain 3 248 343 IPR042265 -
Lele41g0795 469 Pfam Putative diphthamide synthesis protein 47 353 IPR016435 GO:0017183|GO:0090560
Lele41g0795 469 TIGRFAM DPH2: diphthamide biosynthesis protein 2 2 463 IPR010014 GO:0017183
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0795 Lele-ChrLele41 17714831 17718471 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0795 41 17714831 17718471 Lele37g0500 37 4080110 4081040 CCT
Lele41g0795 41 17714831 17718471 Lele38g0468 38 3779475 3779795 CCT
Lele41g0795 41 17714831 17718471 Lele39g0925 39 18195775 18196726 CCT
Lele41g0795 41 17714831 17718471 Lele40g0440 40 3640381 3641290 CCT
Lele41g0795 41 17714831 17718471 Lele43g0605 43 5404211 5410412 hybridization
Lele41g0795 41 17714831 17718471 Lele44g0559 44 4361751 4365868 hybridization