Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0503 ATGCCGACGTACAAGATTTGGGGAATCGATGTAGAATTCCCATTTGAGGCCTATGATTGTCAGCTTGTTTACATGGATAAAGTCATACAATCACTTCAGGAGCAATGTAATGCACGGTTGGAGAGTCCCACAGGAACTGGCAAAACACTTTGTCTTCTATGTGCTACATTAGCTTGGCGGAAGAGTTTGGGCAGTTTCTCAACTGGTGCGAATGTTAAGACCATTCAGAATTCTGGGGGCAATGTAGACATTTCACCTTCACAACCTGAGGCTTCAAAGCTTCCTACTATTGTATATGCTTCACGCACTCACAGTCAGATCCGCCAAGTAATTCAAGAGTTGAAGAGAACATCATACAGCTGTTCATGTAGGGTGTTAAGTGTTGTCAAGGAAAGATGGAAACATAGATTTGAGAGCTACACTGGGTGCTATTTGGTTTCTAGAAGGCCCAAAATGGTTGTTCTAGTATCTCAAGAGCAACTGTGCATTCATGATCAGGTGAGTCTACTTAGGGGAAGGACACAAACAAATGCTTGCCAGTTACTCTGCCGAAGGCGTGACAAGAATGGCAAGCGTCAATGTAACCATAACGATCTTGTCCTTGAATACTCAAAGAGAAACCCCCATCTTGGAGAAGAACCTATAGATATTGAGGATTTGGTGAACATTGGAAAAAGATTTGGGCCGTGTCCTTCCTACTTATCAAAAGAGCTCCACAAGGCTGCTGATATAGTGTTTGCACCATACAACTATCTTATTGATCGTGGGTATAGAAAATCTCTGAATATTTCTGGGAATGATAGTATACTCATATTTGATGAAGCTCACAACCTGGAAGGCTTATGTGCTGATGCTGCCTCTTTTGACTTGCCTTCTTGGCTTCTAACAGCTTGCATTTCTGAGGCTCAAAGTTGTGTTGATCTTTGTATAGACAGAAGAGACAAATTAAATGATAAGTCACGGAATCCAGATGATTTTGCTATCCTTAAAGCACTTCTACTAAAACTTGAAAAGCGACTTGCTGACATACCTATTGATTCCAAGGAATTGGGGTACACCAAACCTGGACCTTATATCAATGAATTTTTCTCTGATCTTAATATCACTCATAAGACAGCTTCTAAGCTTAAGCGTACAATTGAAGAAGCTGGGATCCTTCTTGAGGAAGATAGTCAGCAGAAGGCAAGTAGCACCAATTTCAGGCTGCACAATATGAGTGACATCATTGACATTGTTTTCAGGGATGAAGGCACGGCTCATGCAAAATACTATCGGGTAAGAATCTGGAATCACATGAAATTAGAGTTACGCCTCAGCTGTTTTTTGATACTTAAAAAGGTTCATGTGAAGGAGGTTGATGCAAAAGCTACGGATAGCATTAAAGGTAAGGCTTCAATGGTCCTTAGTTGGTGGTGCTTTAATCCAGGAATAGCCATGGGAGTTTTTCCTAAGTTGGGTGTTGGCTCAGTTATACTGACTTCTGGCACATTATCTCCCATGGAATCTTTTGCTCAAGAGCTGAAAATGTTGGAATCATTTTTGCTCGATGTGCTGATTAAATGCTATAAGGGATCTGGAGATGTCAAAACTTCAGTTGTTTTGATTCTTGTAAGAGAAAAGGAAAGAAATGCCCTAAATGTAAGTGAAGGATTAGATTTTGCAGACCATGCTGGAAGAGCTGTGATGATAATTGGTATGCCATTTGCCACAAGTAATGATCCTAAGAGAAATACTTGTTCTTCATTAGTTGAAATAGCAGCTAACATTGCAATCAGTTGGTCCAGTTTGGCTGTTCAACCAATTCATGGCTACTCTGGCTACTTGGGTGGAACTCAACCAGAACCTGGATTAGTTCCAGGTTCCTCTGGTCAAATGAGCCAGTTCAGGGTTTTAACTGGAGAAGAGTGGTATAATCAGCAAGCTTCACGTGCAGTGAATCAAGCTGTTGGACGTGTAATCCGTCACCGCCATGACTATGGAGCAATTATCCTTTGTGATGAAAGGTTTGCACATCCACATCGTCAGTCTCAAGTCTCACGATGGATACAGCCTCATATCAAGTCGCGGCCCTACAAAGCTGTCATTATTAGAAGCTGGAAATGGGGACTACGTCAGCGATACCTTCACTTGGTGCTACAGAAGGCCGTGTTCCATATCTGGGGGGACATTATGCCTGCTAATCGTGCTTCTCTTGCATGTAACAATTGCAAGAATATAGGCTGTAAGAATTCAAGAGACATATGTAATGATGTTTCACATGGGATGGAGATTCCATCAGGAGACAATGAAGTAATTGATTTGGCTGGTGGTGCTCAACATGCCAAAAAAGTAAAAGGTATACAGACAGCACCTTTGGCCAAGAAGCGTAGATTTATAAGTGGAGAGTATGACTTAATGCAACATAGTGAACTTTCCGATCAGCATACACTTGTCCGTCAGAATGCTGAAAGTGGTGTGGAACTCTTGCGTAAGGATAATGGGGCCTCGCAAAGTAGTAGGAATATCGAGCTTCTTACACAAAAAGATAATCGCCCTCCAGATTCTGGACCTCATGCAGATGAGGAAACCCGGGGGTCGGCATTCCTTGTTCAGGTTAGGGAGAAGCTCAGTGGTGCAGAGTATAAAGACTTTGTGAGCTATATGAAGGCTCTCAAGACCAAAGCCATGATGATGAGTGAAGTTTTGCAGGGGAAAATTATCAGGTGTGAATGGTTGAAAAAGGAGTCGTTAAATTCAAATATTGGTCAAGCAGTTATTTTTTGTAGAGCTGGACCAAGATGA 2781 0.4186 MPTYKIWGIDVEFPFEAYDCQLVYMDKVIQSLQEQCNARLESPTGTGKTLCLLCATLAWRKSLGSFSTGANVKTIQNSGGNVDISPSQPEASKLPTIVYASRTHSQIRQVIQELKRTSYSCSCRVLSVVKERWKHRFESYTGCYLVSRRPKMVVLVSQEQLCIHDQVSLLRGRTQTNACQLLCRRRDKNGKRQCNHNDLVLEYSKRNPHLGEEPIDIEDLVNIGKRFGPCPSYLSKELHKAADIVFAPYNYLIDRGYRKSLNISGNDSILIFDEAHNLEGLCADAASFDLPSWLLTACISEAQSCVDLCIDRRDKLNDKSRNPDDFAILKALLLKLEKRLADIPIDSKELGYTKPGPYINEFFSDLNITHKTASKLKRTIEEAGILLEEDSQQKASSTNFRLHNMSDIIDIVFRDEGTAHAKYYRVRIWNHMKLELRLSCFLILKKVHVKEVDAKATDSIKGKASMVLSWWCFNPGIAMGVFPKLGVGSVILTSGTLSPMESFAQELKMLESFLLDVLIKCYKGSGDVKTSVVLILVREKERNALNVSEGLDFADHAGRAVMIIGMPFATSNDPKRNTCSSLVEIAANIAISWSSLAVQPIHGYSGYLGGTQPEPGLVPGSSGQMSQFRVLTGEEWYNQQASRAVNQAVGRVIRHRHDYGAIILCDERFAHPHRQSQVSRWIQPHIKSRPYKAVIIRSWKWGLRQRYLHLVLQKAVFHIWGDIMPANRASLACNNCKNIGCKNSRDICNDVSHGMEIPSGDNEVIDLAGGAQHAKKVKGIQTAPLAKKRRFISGEYDLMQHSELSDQHTLVRQNAESGVELLRKDNGASQSSRNIELLTQKDNRPPDSGPHADEETRGSAFLVQVREKLSGAEYKDFVSYMKALKTKAMMMSEVLQGKIIRCEWLKKESLNSNIGQAVIFCRAGPR 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0503 926 Gene3D - 15 317 IPR027417 -
Lele44g0503 926 Gene3D - 494 688 IPR027417 -
Lele44g0503 926 Pfam DEAD_2 99 291 IPR010614 GO:0003677|GO:0003678|GO:0005524
Lele44g0503 926 MobiDBLite consensus disorder prediction 824 841 - -
Lele44g0503 926 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 7 332 IPR014013 GO:0005524
Lele44g0503 926 MobiDBLite consensus disorder prediction 823 859 - -
Lele44g0503 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 299 IPR027417 -
Lele44g0503 926 SMART Cxpdneu3 497 671 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Lele44g0503 926 SMART deadxpd 9 321 IPR006554 GO:0003678|GO:0016818
Lele44g0503 926 Pfam Helicase C-terminal domain 546 684 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Lele44g0503 926 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 8 509 IPR045028 -
Lele44g0503 926 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 29 317 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0503 Lele-ChrLele44 3857432 3871539 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g0503 44 3857432 3871539 Lele37g0441 37 3591172 3616036 CCT
Lele44g0503 44 3857432 3871539 Lele38g0406 38 3254495 3256589 CCT
Lele44g0503 44 3857432 3871539 Lele39g0989 39 18716405 18718692 CCT
Lele44g0503 44 3857432 3871539 Lele40g0386 40 3099977 3109795 CCT
Lele41g0853 41 18218017 18228225 Lele44g0503 44 3857432 3871539 hybridization
Lele42g0844 42 21314603 21327014 Lele44g0503 44 3857432 3871539 hybridization