Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0844 ATGCCGACGTACAAGATTCGGGGAATCGATGTAGAATTCCCATTCGAGGCCTATGATTGTCAGCTTGTTTACATGGATAAAGTCATACAATCACTTCAGGAGAGTTTGGGCAGTTTCTCAACTGGTGCGAATGTTCAGACCACTCAGAATTCGGGAGGCAATGTAGACATTTCACCTTCACAACCTGAGGCTTCAAAGCTTCCTACTATTGTATATGCTTCACGCACTCACAGCCAGATCCGCCAAGTAATTCAAGAGTTGAAGAGAACATCATACAGGCCCAAAATGGTTGTTCTAGGATCTCGGGAGCAACTGTGCATTCATGATCAGGTGAGTCTACTTAGGGGAATGGCACAAACAAATGCTTGCCAGTTACTCTGCCGAAGGCGTGGCAAGAATGGCAAGCGTCAATGTAACCATAATGATCTTGTCCTTGAATACTCAAAGAGAAACCCCCATCTTGGAGAAGAACCTATAGATATTGAGGATTTGGTGAACATTGGAAGAAGATTTGGGCCGTGTCCTTACTACTTATCAAAAGAGCTCCACAAGGCTGCTGATATGGTGTTTGCACCATACAACTATCTTATTGATCGTGGGTATAGAAAATCTCTGAATATTTCTTGGAATGATAGCATACTCATATTTGATGAAGCTCACAACCTGGAAAGCTTATGTGCTGATGCTGCCTCTTTTGACTTGCCTTCTTGGCTTCTAACAGCTTGCATTTCTGAGGTTCAAAGTTGTGTTGATCTTTGTATAAACAGAAGAGACAAATTAAATGATAAGTCACAGAATCCAGATGATTTTGCTATCCTTAAAGCACTTCTACTAAAACTTGAAAAGCGAATTGCTGACGTACCTATTGATTCCAAGGAATTGGGATACACCAAACCTGGACCTTATATCTATGAAATTTTCTCTGATCTTAATATTACTCATAAGACAGCTTCTAAGCTTAAGCGTACAATTGAAGAAGCTGGGATCCTTCTTGAGGAAGATAGTCAGCAGAAGGCAAGTAGCACCAATTTCGGGCTGCACAATATGAGTGACATCATTGGCATTGTTTTCAGGGATGAAGGCACTGCTCATGCAAAATACTACCGGGGCACATGTAAGGCTTCAAGGGTCTTTAGTTGGTGGTGCTTTAATCCAGGAATAGCCATGGAAGTTTTTTCTAAGTTGGGCGTTGGCTCTGTTATATTGACTTCTGGCACATTATCTCCCATGGAATCTTTTGCTCAGGAGCTGAAAATGTTAGAATCATTTTTAGATTTTCCCATTCGGCTAGAAAATCAACATGTAATAACCCCAAATCAGATTTGGGCTGGAGTTGTATCAGTTGGCCCTTCAGGGCGTACTTTTAACTCTTCCTACCGCACACGTGATTCTATAGAGTACAAGCTGGAGCTTGGTAATACAATTGTCAATTTGGCTCGAATTGTTCCTGATGGACTTCTTGTATTCTTCCCATCTTATTACCTTTTGAACGAATGCATTGGGTGCTGGAAAAACGTGAATAATGGAAATTCAACATCAATATGGGAGAGAATTGGCAAACATAAGAAACCTGTCATAGAACCCAGGCAATCTTCTGAGTTTTCCCTATCAATTGAGGACTACATATCTAAGCTGAAAGACGCCTCTGCATCTGGAGCAGTATTTTTTGCGGTTTGTCGTGGCAAGATACCTGCTGGATGTGCTGATTATAAAATTCTTGAGTTTGACCCAGAAGAAAGCAAAAACAAAAATATTGTATACATTGTAAGTGAAGGATTAGATTTTGCAGACCATGCTGGAAGAGTTGTTATGTTAATTGGTATGCCATTTGCCACAAGTAATGATCCTAAGGTTCGTCTAAAGCGAGAATATTTGGATCAACAATCTCAAACCCAAGGAGAATTGTGTAAGGTTTTAACTGGAGAAGAGTGGTATAATCAGCAAGCTTCACGTGCAGTGAATCAAGCTGTTGGACGTGTAATCCGTCACCGCCATGACTATGGAGCAATTATCCTTTGTTATGAAAGGTTTGCACATCCACATCGTCAGTCTCAAGTCTCACGTTGGATACAGCCTCATATCAAGTGTTTCTCAAAATTTGGAGAAGTAGTTTTTACGTTAACTCGATTTTTCCGTGATGGAGGAAGTCGCGGCCCTACAAAGCTGTCATTATTAGAAGCTGGAAATGGGGGGAATTTTGCAGAAAAGACATCAGAGCCCTGCCTGGACAAATTTGGCCTGGAAAAACTCGTCTCTGCTCCTGTAAATTCTTTTTTGTGCATTACTACGTCAGCGATACCTTCACTTGGTGCTACAGAAGGCCGTGTTCCGAATCTGGGGGAAATTATGCCTGCTAATCGTGCTTCTCTGGCGTTTAACAATTGCAAGAATATAGGCTGTAAGAATTCAAGAGACATATGTAATGATTTTTCACATGGGAGGGAGATTCCATCAGAAGACTATGAAGTAATTGATTTGGCTGGTGGTGCTCAACATGCCAAAAAAGTAAAGGGTATACAGACGGCACCTTTGGCCAAGAAGCGTAGATTTATAAGTGGAGAGTATGACTTAATGCAACATAGTGAACATTCCGATCAGCATGCACTTGTCCGTCAGCATGCTCAAAGTGGTGTGGAACTCTTGCATAAAGATAATGGGGCCTCCCTAAGTAGGAGTAGGAATATTCTTACTCAAAAAGATAATCGTCCTCCAGATTCTGGACCTCATGCAGATGAGGAAACCCGGGGATCGGCATTCCTTGTTCAGGTTAGGGAGAAGCTCAGTGGTGCAGAGTATAAAGACTTTGTGAGCTATATGAAGGCTCTCAAGACCAAAGCCATGATGATGAGTGAAGTTTTGCAGTCCATATGCAGGATAGGGGCTTCATTGCTTGATGCTTTGTGTAAGAAGAAAATTGAAATTGCTGATGTTCTGACATCACCTTCACCTGCATCTTCGCATTCCTGTTTTCAATAG 2976 0.416 MPTYKIRGIDVEFPFEAYDCQLVYMDKVIQSLQESLGSFSTGANVQTTQNSGGNVDISPSQPEASKLPTIVYASRTHSQIRQVIQELKRTSYRPKMVVLGSREQLCIHDQVSLLRGMAQTNACQLLCRRRGKNGKRQCNHNDLVLEYSKRNPHLGEEPIDIEDLVNIGRRFGPCPYYLSKELHKAADMVFAPYNYLIDRGYRKSLNISWNDSILIFDEAHNLESLCADAASFDLPSWLLTACISEVQSCVDLCINRRDKLNDKSQNPDDFAILKALLLKLEKRIADVPIDSKELGYTKPGPYIYEIFSDLNITHKTASKLKRTIEEAGILLEEDSQQKASSTNFGLHNMSDIIGIVFRDEGTAHAKYYRGTCKASRVFSWWCFNPGIAMEVFSKLGVGSVILTSGTLSPMESFAQELKMLESFLDFPIRLENQHVITPNQIWAGVVSVGPSGRTFNSSYRTRDSIEYKLELGNTIVNLARIVPDGLLVFFPSYYLLNECIGCWKNVNNGNSTSIWERIGKHKKPVIEPRQSSEFSLSIEDYISKLKDASASGAVFFAVCRGKIPAGCADYKILEFDPEESKNKNIVYIVSEGLDFADHAGRVVMLIGMPFATSNDPKVRLKREYLDQQSQTQGELCKVLTGEEWYNQQASRAVNQAVGRVIRHRHDYGAIILCYERFAHPHRQSQVSRWIQPHIKCFSKFGEVVFTLTRFFRDGGSRGPTKLSLLEAGNGGNFAEKTSEPCLDKFGLEKLVSAPVNSFLCITTSAIPSLGATEGRVPNLGEIMPANRASLAFNNCKNIGCKNSRDICNDFSHGREIPSEDYEVIDLAGGAQHAKKVKGIQTAPLAKKRRFISGEYDLMQHSEHSDQHALVRQHAQSGVELLHKDNGASLSRSRNILTQKDNRPPDSGPHADEETRGSAFLVQVREKLSGAEYKDFVSYMKALKTKAMMMSEVLQSICRIGASLLDALCKKKIEIADVLTSPSPASSHSCFQ 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0844 991 Gene3D - 451 696 IPR027417 -
Lele42g0844 991 FunFam Regulator of telomere elongation helicase 1 homolog 16 269 - -
Lele42g0844 991 Gene3D - 232 384 - -
Lele42g0844 991 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 7 270 IPR014013 GO:0005524
Lele42g0844 991 Gene3D Bacterial XPD DNA helicase, FeS cluster domain 101 177 IPR042493 -
Lele42g0844 991 MobiDBLite consensus disorder prediction 891 917 - -
Lele42g0844 991 SMART Cxpdneu3 493 679 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Lele42g0844 991 CDD SF2_C_XPD 439 677 - -
Lele42g0844 991 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 6 563 IPR045028 -
Lele42g0844 991 Gene3D - 69 417 IPR027417 -
Lele42g0844 991 Pfam DEAD_2 72 235 IPR010614 GO:0003677|GO:0003678|GO:0005524
Lele42g0844 991 SMART deadxpd 9 265 IPR006554 GO:0003678|GO:0016818
Lele42g0844 991 MobiDBLite consensus disorder prediction 43 62 - -
Lele42g0844 991 Pfam Helicase C-terminal domain 475 564 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Lele42g0844 991 Pfam Helicase C-terminal domain 589 692 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0844 Lele-ChrLele42 21314603 21327014 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0844 42 21314603 21327014 Lele43g0538 43 4856979 4879030 hybridization
Lele42g0844 42 21314603 21327014 Lele44g0503 44 3857432 3871539 hybridization