Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g0500 ATGGCGCCTCACTCAACTCTTACTTCATCCTCCGTAATAGTCGTCGCCGTCGTCTTCTCCCTCACTCTCTGGTTTCACTTCGACGTCCTCCTGGAGATCTTTCGCAGTCTCAGGAATTTCCTCTACAACAGACCCAACACTATGAAGTTCAAAGAGGTCTCTCTCCCTCAAGATTGCTATGTCTTCAAACAAGAAACCCACCTCACCGTCCTCAAAACCTCCCTCTTCTTCGCCGGTGACGGCTTCACCGTATACAACTCCCACGGCCAACTCGTCTTCCGTGTCGACTCCTACGGCCCCCAATCCCGCCTCCAAGATCAAGTCGTCCTCATGGATCCCCGCGGCCGCTGCCTCCTCACCGTCCGGCGCAAGAGGCCGAGTTTGCATCGACGGTGGGAGGGATTTAGAGGGGAGAGGGTGGATGGTGACAAGCCGATCTTCTGCGTGAAGAGATCGTCGATGATCGGAAGGGCGAGGACAACGGTGACGGTGGAGGTGTATGACGGCTCCGGGGAGGAGTACCAGATCGAAGGGTGTTTCTCGCAGCGGAGCTGCAAGATCTATAACGCGAAGAGGAAAGTGGTGGGGGAGATTCGACGGAAGGTGGACCCCACCACGAATGTGATGCTGGGGAAGGAAGTGTTGTCGCTCTGCGTTAAGGCAGGCTTTGATGGGGCCTTCGCTATGGGATTGGTCCTGGTTCTTGATCAGATGAACGGTGAGAGTTATGTCGACAGTGGAGCACCAGGGCGTGTGGTGCACCCTTCCGCAGAGTATTAA 780 0.5577 MAPHSTLTSSSVIVVAVVFSLTLWFHFDVLLEIFRSLRNFLYNRPNTMKFKEVSLPQDCYVFKQETHLTVLKTSLFFAGDGFTVYNSHGQLVFRVDSYGPQSRLQDQVVLMDPRGRCLLTVRRKRPSLHRRWEGFRGERVDGDKPIFCVKRSSMIGRARTTVTVEVYDGSGEEYQIEGCFSQRSCKIYNAKRKVVGEIRRKVDPTTNVMLGKEVLSLCVKAGFDGAFAMGLVLVLDQMNGESYVDSGAPGRVVHPSAEY 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g0500 259 PANTHER - 65 239 IPR007612 -
Lele37g0500 259 Pfam LURP-one-related 57 234 IPR007612 -
Lele37g0500 259 SUPERFAMILY Tubby C-terminal domain-like 58 239 IPR025659 -
Lele37g0500 259 Gene3D - 57 243 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g0500 Lele-ChrLele37 4080110 4081040 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g0604 43 5399573 5400166 Lele37g0500 37 4080110 4081040 CCT
Lele44g0558 44 4355380 4355960 Lele37g0500 37 4080110 4081040 CCT
Lele41g0795 41 17714831 17718471 Lele37g0500 37 4080110 4081040 CCT
Lele42g0781 42 20791106 20795251 Lele37g0500 37 4080110 4081040 CCT
Lele37g0500 37 4080110 4081040 Lele37g0500 37 4080110 4081040 ECH
Lele37g0500 37 4080110 4081040 Lele39g0925 39 18195775 18196726 hybridization
Lele37g0500 37 4080110 4081040 Lele40g0440 40 3640381 3641290 hybridization