Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0925 ATGGGCTCCTACTTCTCTGCGCCTTCCTTTTTTCTTCTTCTTCAGCTTTCCAACTCCTATATATACATGGCGCCTCCCTTAACTGTTTCTTCATCCTGCGTCATCGTCGTCTTCTCCCTCACTCTCTGGTTTCACTTCGACGTCCTCCTGGAGATCTTTCGCATACTCAGAAATTTCCTCTACAACAGATCCAACACTATGAAGTTCAAAGAGGTTTCTCTCCCTCAAGATTGCTATGTCTTCAAACAAGAAACCCACCTCACCGTCCTCAAAACCTCCCTCTTCTTCGCCGGCGACGGCTTCACCGTGTACAACTCCCACGGCCAACTCGTCTTCCGTGTCGACTCCTACGGCCCCCAATCCCGCCTCCAAGATCAAGTCGTCCTCATGGATCCCCGCGGCCGCTGCCTCCTCACCGTCCGCCGCAAGAGGCCGAGTTTGCATCGACGGTGGGAGGGATTTAGAGGAGAGAGGGTGGATGGTGACAAGCCGATCTTCTGCGTGAAGAGATCGTCGATGATCGGAAGGGCGAGGACGACGGTGACGGTGGAGGTGTATGACGGCTCCGGGGAGGAGTACCAGATCGAAGGGTGTTTCTCACAGCGGAGCTGCAAGATCTATAACGCGAAGAGGAAAGTGGTGGGGGAGATTCGACGGAAGGTGGATCCCACCACGAAAGTGATGCTGGGGAAGGAAGTGTTCTCGCTCTGCGTTAAGGCAGGCTTTGATGGGGCCTTTGCTATGGGATTGGTCCTGGTTCTTGATCAGATGAACGGGGATAGTAATGTCGACAATGGAGCCCCAGGGCGTGTGGTGAACCCTTCCGCAGAGGTTTAA 837 0.5412 MGSYFSAPSFFLLLQLSNSYIYMAPPLTVSSSCVIVVFSLTLWFHFDVLLEIFRILRNFLYNRSNTMKFKEVSLPQDCYVFKQETHLTVLKTSLFFAGDGFTVYNSHGQLVFRVDSYGPQSRLQDQVVLMDPRGRCLLTVRRKRPSLHRRWEGFRGERVDGDKPIFCVKRSSMIGRARTTVTVEVYDGSGEEYQIEGCFSQRSCKIYNAKRKVVGEIRRKVDPTTKVMLGKEVFSLCVKAGFDGAFAMGLVLVLDQMNGDSNVDNGAPGRVVNPSAEV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0925 278 Gene3D - 76 263 IPR038595 -
Lele39g0925 278 PANTHER - 84 259 IPR007612 -
Lele39g0925 278 Pfam LURP-one-related 76 253 IPR007612 -
Lele39g0925 278 SUPERFAMILY Tubby C-terminal domain-like 77 258 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0925 Lele-ChrLele39 18195775 18196726 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g0604 43 5399573 5400166 Lele39g0925 39 18195775 18196726 CCT
Lele44g0558 44 4355380 4355960 Lele39g0925 39 18195775 18196726 CCT
Lele41g0795 41 17714831 17718471 Lele39g0925 39 18195775 18196726 CCT
Lele42g0781 42 20791106 20795251 Lele39g0925 39 18195775 18196726 CCT
Lele39g0925 39 18195775 18196726 Lele39g0925 39 18195775 18196726 ECH
Lele37g0500 37 4080110 4081040 Lele39g0925 39 18195775 18196726 hybridization
Lele38g0468 38 3779475 3779795 Lele39g0925 39 18195775 18196726 hybridization