Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0440 ATGCCTCACTTAACTCTTTCTTCATCCTCCGTTATCGTCGTCGTCCTCTTCTCCCTCACTCTCTGGGTTCACTTCGACGTCCTACTGGAGATCTTTCGCAGATTCAGAAATTTCATCTACAACAGAGCCCACACCATGAAGTTCAAAGAGGTCTCTCTCCCTCAAGATTGCTACGTCTTCAAACAAGAAACCCACCTCACCGTCCTTAAAACCTCCCTCTTCTTCGCCGGCGATGGCTTCACCGCCTACAACTCCCACGGACAACTCGTCTTCCGTGTCGACTCATACGGCCCCCAATCCCGCCTCCAAGATCAAGTCGTCCTCATGGATCCCCGTGGCCGCTGCCTCCTCACCGTCCGCCGCAAGAGGCCGAGTTTGCATCAACGGTGGGAGGGATTTAGAGGGGAGAGGATGGACGGAGACAAGCCGATCTTCTGCTTGAAGAGATCGTCGATGATCGGAAGGTCGAGGACGACGTTGACGGTGGAGGTGTACGACGGCTCCGGGGAGGAGTACCAGATCGAAGGGTGTTTCTCGAAGCGGAACTGCAAGATCTGCAACGGCAAGAGGAAAGTGGTGGCGGAGATTCGACGGAAGGTGGACCCCACCACGAATGTGATGCTGGGGAAGGAAGTGTTCTCACTCTGTGTTAAGGCAGGCTTCGATGGGGCCTTCGCGATGGGATTGGTCCTGGTTCTGGATCGGATGAACTGTGAAAGTTACGTCGATAATGGAGCACCAGAGCGTGTGGTGCACCCTTCCGCAGAGTATTAA 774 0.5465 MPHLTLSSSSVIVVVLFSLTLWVHFDVLLEIFRRFRNFIYNRAHTMKFKEVSLPQDCYVFKQETHLTVLKTSLFFAGDGFTAYNSHGQLVFRVDSYGPQSRLQDQVVLMDPRGRCLLTVRRKRPSLHQRWEGFRGERMDGDKPIFCLKRSSMIGRSRTTLTVEVYDGSGEEYQIEGCFSKRNCKICNGKRKVVAEIRRKVDPTTNVMLGKEVFSLCVKAGFDGAFAMGLVLVLDRMNCESYVDNGAPERVVHPSAEY 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0440 257 PANTHER - 63 237 IPR007612 -
Lele40g0440 257 Pfam LURP-one-related 55 232 IPR007612 -
Lele40g0440 257 Gene3D - 55 240 IPR038595 -
Lele40g0440 257 SUPERFAMILY Tubby C-terminal domain-like 56 238 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0440 Lele-ChrLele40 3640381 3641290 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g0604 43 5399573 5400166 Lele40g0440 40 3640381 3641290 CCT
Lele44g0558 44 4355380 4355960 Lele40g0440 40 3640381 3641290 CCT
Lele41g0795 41 17714831 17718471 Lele40g0440 40 3640381 3641290 CCT
Lele42g0781 42 20791106 20795251 Lele40g0440 40 3640381 3641290 CCT
Lele40g0440 40 3640381 3641290 Lele40g0440 40 3640381 3641290 ECH
Lele37g0500 37 4080110 4081040 Lele40g0440 40 3640381 3641290 hybridization
Lele38g0468 38 3779475 3779795 Lele40g0440 40 3640381 3641290 hybridization