Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0623 ATGATGGATCCTAGCAATCATTCACCTGTTGATGGCCTTGAAGTGGTTCATCAAAATGGTGTTCATGAGGAACCTTTTAACTCCGGAAAGGATGTTGTTGTCTCAAATGATATAGACCTCAATACTGCTGAAATTATAGACACTGATGCTTTAAATGGGAACTTTGAAAAGATTGTCCAGTTGGATAATAGTGCTACCAATGACTCGTGTGTGGGAGAAATAAAAGAAGGACCAATTGACAATATGGACAGCAACAATGCGACCATTTCTAAGGAAGAGAAGGAGAAAACCAATGATCAAACAAAACAATCACGAGCGTTAAAAGTTCCTGTTAAGCATAAGAATGGAAAGCTCCCAAGTCCTAAAGGCATTCATGCTAGTGGGCCAAAGAAAAGCAAAGATGGAAAAGATGAAGAGGCACTATCTTCTGTTTCAAATGGTAACCTATCCTCAAAAACTCACCCAAGACAACCTATTAAAAGCAAACAATTCAATGAAAAGCAGATTCAAATGTCCAAGCATTCTGGAAAGTCTGATGCAGCATCTTCCAAAGCACCCTTGGAGAAGAAAATCCCAAAATTATTGAATAAAGAACCCCTCGATGAAGTTAAAGGAGAAGCAGAATCTTCAATCACCATTGAAGAAGATACCAAATCCCGGAGGGTAGGAACACTTCCTAATTATGGATTTAGTTTCAAGTGTGGTGAACGAGCTGAGAGAAGAAAAGAGTTCTACACTAAACTAGAGGAAAAAATTCATGCAAAGGAATTGGAGGAGAGTAACTTGCAAGCAAAGACCAAGGAGACTCAAGAAGCTGAGATTAAGATGTACCGGAAGAGTCTAACATTTAAAGCAACCCCAATGCCAAGTTTCTACCAGGAGCCTCCTCCTCCAAAGGTGGAGTTAAAGAAGATACCAACTACGAGAGCAAAATCTCCCAAGCTTGGTCGAAAGAAGAATTCAGTCAACCCAGAGTCAGAAGGAAACACTGGCAGCAGTGGTAGACAAGGTCGTTTAAGTCTAGATGAGAACCCCATTAAAGTTATGCCGGCCCATCAAAAGAAGCCACAGAGGAAATCTCTTCCGCCACGACTGCATTCTGAAAGGACCAGTTCATCCACCCCAAAAACTGCAAGCACTTCATCCAAGACAATGCATCACAGCAAGACCTCCTCACCCTGCGTAACAAACAAAGATAGCACCTTATCCAGTGCCACCATGGAAGAGAAAACTGAAATTGCTGCAGGAAATGAAGAGAACAATACCTTCTCTAGTGAGATAGGCGAAGCTCCATCCTGCATCGAAGAGACATCTGCAAACCTCTCGGACAAGCCCGGTGAAGCAGAATCCCATGTGAACAGTGACATAGTGGTTGAAGAGCAAACTCAGCTTTCCTCGGTGCAAGAACCCATTGTGGCAGAGCATTAA 1428 0.423 MMDPSNHSPVDGLEVVHQNGVHEEPFNSGKDVVVSNDIDLNTAEIIDTDALNGNFEKIVQLDNSATNDSCVGEIKEGPIDNMDSNNATISKEEKEKTNDQTKQSRALKVPVKHKNGKLPSPKGIHASGPKKSKDGKDEEALSSVSNGNLSSKTHPRQPIKSKQFNEKQIQMSKHSGKSDAASSKAPLEKKIPKLLNKEPLDEVKGEAESSITIEEDTKSRRVGTLPNYGFSFKCGERAERRKEFYTKLEEKIHAKELEESNLQAKTKETQEAEIKMYRKSLTFKATPMPSFYQEPPPPKVELKKIPTTRAKSPKLGRKKNSVNPESEGNTGSSGRQGRLSLDENPIKVMPAHQKKPQRKSLPPRLHSERTSSSTPKTASTSSKTMHHSKTSSPCVTNKDSTLSSATMEEKTEIAAGNEENNTFSSEIGEAPSCIEETSANLSDKPGEAESHVNSDIVVEEQTQLSSVQEPIVAEH 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0623 475 PANTHER PROTEIN WVD2-LIKE 4 94 435 IPR044833 GO:0008017
Lele28g0623 475 Coils Coil 245 275 - -
Lele28g0623 475 MobiDBLite consensus disorder prediction 285 452 - -
Lele28g0623 475 MobiDBLite consensus disorder prediction 366 428 - -
Lele28g0623 475 MobiDBLite consensus disorder prediction 90 231 - -
Lele28g0623 475 Pfam Targeting protein for Xklp2 (TPX2) domain 230 300 IPR027329 -
Lele28g0623 475 MobiDBLite consensus disorder prediction 141 179 - -
Lele28g0623 475 MobiDBLite consensus disorder prediction 322 339 - -
Lele28g0623 475 MobiDBLite consensus disorder prediction 183 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0623 Lele-ChrLele28 3971757 3975195 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0623 28 3971757 3975195 Lele02g0625 02 3740650 3743114 CCT
Lele28g0623 28 3971757 3975195 Lele04g0644 04 3880299 3882750 CCT
Lele01g0651 01 3806642 3814591 Lele28g0623 28 3971757 3975195 CCT
Lele02g0639 02 3822301 3828569 Lele28g0623 28 3971757 3975195 CCT
Lele03g0650 03 3811014 3819821 Lele28g0623 28 3971757 3975195 CCT
Lele04g0657 04 3953879 3962388 Lele28g0623 28 3971757 3975195 CCT