Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele04g0644 | ATGTCTAAAGTCATCGGCTTCACCGGAGGTGACGATTTTTGCCCTGGGGGATCAATATACACTAATCCCAAGGAATCTAATATATTGTTTTCTCTTGGCAACCATGTTGATGTTTACTTTCCTCCTCGGAAGAGATCTCGCGTCAAAGCACCTTTTGTTTTTGACGGAGAATGGTTTGAACAGAAGAAGACATCTATCGAAGCTTTGCCAGATGAATGCCTCTTTGAGATCTTTAGAAGGCTACCTGTAGGCCAAGAAAGGAGTGCATGTGCCCGTGTTTCTAAGCGCTGGCTTATGCTTTTAAGCAGTATTTGTAAGGATGAAATCTTCAGCAACAAAATTACCAGATCTGAGAACGAGGTTTGTGAAAAGGGGGTTGATAATCTGGAATTTGGGGGTGATGGTTACCTGTCGCGGAGCTTGGTAGGTAAGAAGGCAACAGATGTTAGACTTGTTGCCATTGCTGTTGGCACTGCTTCTCGTGGAGGTCTGGGAAAACTTTCAATCCATGGGAGCAATTCAGATCGTGGGGTGACCGATCTAGGTCTCAAGTCTGTTGCCCATGGATGCCCTTCATTAAAGGGGCTTTCACTATGGGATATTGCTACCATCGGTGATGAGGGCCTAATTGCTATCGCTAATGGATGTCATCAGCTAGAGAAGCTGGACCTTTGCAAGTGCCCGACAATTTCTGACAAGGCTTTGATTGCAATTGCAAAGAACTGCCCTCATTTGACTGAGTTATCCATAGAATCATGTCCTAAGATCGGTAATGAAGGTCTACAAGCTATTGGGCAGTTGTGCCCCAATCTGAGGTCTATTTCAATCAAGAACTGCACCTCTGTTGGTGATCAGGGAATTGCAAGCCTGCTCTCTTCACGTTCTTTCGATTTGGCAAAGGTGAAGCTTCAGGGTCTGGCCATTTCTGACCTCTCTCTCGCAGTTATTGGACACTATGGAAAGGCGGTTACTGATCTTGTCCTATCCTGCCTCCCAAATGTTGGTGAGAAGGGGTTCTGGGTCATGGGTAATGGTCATGGGTTGCAGAAGCTCAAGTCACTCACAATTGCATCCTGCCCTGGAGTTACAGATGTCGGGCTTGAATCTGTTTCCAAGGGTTGTCCAAATCTCAAACACTTCCACCTTCGTAAATGCTCATTTCTATCGGACAACGGATTGTTATCATTTGCCAAAGCTGCTGTATCACTTGAGAGCCTGCAATTGGAGGAGTGCCACAGGATCACCCAGCTTGGGTTTTTTGGTGTTATTACCTGTAGTGCAAGATTGAAGGCTCTTGCCCTCATGAGTTGCTTTGGATTCAGAGATCTGAATATGAGATTGCCTCAGGTGTCTCCTTGCAAATCGCTCCAGTCACTAACAATCTGTAACTGCCCTGGATTTGGTGATTCTACCTTGGCTGTGCTAGGAAAGTTGTGTCCTCAGCTGCAGCATATTGAATTAAGTCGCCTCGAGGGGGTGACAGATGCTGGGTTGCTTCCACTGATTGAATGCTCTGAGGCTGGTCTGGTTAAGGTTAATCTTAGTGGTTGCGTAAATCTGACTGACAAAGTGGTCTTATCAATGACCAATAAGCATGGTTGGACACTTGAGATGCTAAATCTTGATGGCTGTAAAAGGATAAGTGATGCTAGCTTGATAGCAATTGCCGGAAATTGCCCATTGCTATCTGATCTTGACATTTCCAAGTGTGCGATCACTGATGCTGGAATTGCAGCCCTGGGAGGTGCTGACCAACTGAACTTGCAGGTCCTTTCTTTGGCAGGTTGCTCCTTGGTTTCAGATAGGAGCCTGTCTAGCTTGACGAAACTGGGCCAGACCCTTTTGGGATTGAATATCCAGCAATGCAAAGCAATCAGCAGCAGATCTGTTGACGTGCTTGTGGAACTTCTTTGGAGGTGTGACTTCCTCTTCTGA | 1935 | 0.4605 | MSKVIGFTGGDDFCPGGSIYTNPKESNILFSLGNHVDVYFPPRKRSRVKAPFVFDGEWFEQKKTSIEALPDECLFEIFRRLPVGQERSACARVSKRWLMLLSSICKDEIFSNKITRSENEVCEKGVDNLEFGGDGYLSRSLVGKKATDVRLVAIAVGTASRGGLGKLSIHGSNSDRGVTDLGLKSVAHGCPSLKGLSLWDIATIGDEGLIAIANGCHQLEKLDLCKCPTISDKALIAIAKNCPHLTELSIESCPKIGNEGLQAIGQLCPNLRSISIKNCTSVGDQGIASLLSSRSFDLAKVKLQGLAISDLSLAVIGHYGKAVTDLVLSCLPNVGEKGFWVMGNGHGLQKLKSLTIASCPGVTDVGLESVSKGCPNLKHFHLRKCSFLSDNGLLSFAKAAVSLESLQLEECHRITQLGFFGVITCSARLKALALMSCFGFRDLNMRLPQVSPCKSLQSLTICNCPGFGDSTLAVLGKLCPQLQHIELSRLEGVTDAGLLPLIECSEAGLVKVNLSGCVNLTDKVVLSMTNKHGWTLEMLNLDGCKRISDASLIAIAGNCPLLSDLDISKCAITDAGIAALGGADQLNLQVLSLAGCSLVSDRSLSSLTKLGQTLLGLNIQQCKAISSRSVDVLVELLWRCDFLF | 644 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele04g0644 | 644 | Gene3D | Ribonuclease Inhibitor | 141 | 255 | IPR032675 | - | |
| Lele04g0644 | 644 | Gene3D | Ribonuclease Inhibitor | 256 | 448 | IPR032675 | - | |
| Lele04g0644 | 644 | SMART | LRR_CC_2 | 479 | 504 | IPR006553 | - | |
| Lele04g0644 | 644 | SMART | LRR_CC_2 | 453 | 478 | IPR006553 | - | |
| Lele04g0644 | 644 | SMART | LRR_CC_2 | 190 | 215 | IPR006553 | - | |
| Lele04g0644 | 644 | SMART | LRR_CC_2 | 216 | 241 | IPR006553 | - | |
| Lele04g0644 | 644 | SMART | LRR_CC_2 | 506 | 531 | IPR006553 | - | |
| Lele04g0644 | 644 | SMART | LRR_CC_2 | 374 | 399 | IPR006553 | - | |
| Lele04g0644 | 644 | SMART | LRR_CC_2 | 400 | 425 | IPR006553 | - | |
| Lele04g0644 | 644 | SMART | LRR_CC_2 | 348 | 373 | IPR006553 | - | |
| Lele04g0644 | 644 | SMART | LRR_CC_2 | 242 | 267 | IPR006553 | - | |
| Lele04g0644 | 644 | SMART | LRR_CC_2 | 533 | 558 | IPR006553 | - | |
| Lele04g0644 | 644 | SMART | LRR_CC_2 | 559 | 583 | IPR006553 | - | |
| Lele04g0644 | 644 | SMART | LRR_CC_2 | 268 | 293 | IPR006553 | - | |
| Lele04g0644 | 644 | SMART | LRR_CC_2 | 585 | 610 | IPR006553 | - | |
| Lele04g0644 | 644 | PANTHER | UNCHARACTERIZED | 535 | 627 | - | - | |
| Lele04g0644 | 644 | FunFam | EIN3-binding F-box protein 1 | 255 | 444 | - | - | |
| Lele04g0644 | 644 | SUPERFAMILY | RNI-like | 180 | 641 | - | - | |
| Lele04g0644 | 644 | Pfam | F-box domain | 69 | 106 | IPR001810 | GO:0005515 | |
| Lele04g0644 | 644 | Gene3D | Ribonuclease Inhibitor | 449 | 643 | IPR032675 | - | |
| Lele04g0644 | 644 | Gene3D | - | 60 | 112 | - | - | |
| Lele04g0644 | 644 | SUPERFAMILY | F-box domain | 61 | 124 | IPR036047 | GO:0005515 | |
| Lele04g0644 | 644 | SMART | fbox_2 | 69 | 110 | IPR001810 | GO:0005515 | |
| Lele04g0644 | 644 | FunFam | EIN3-binding F-box protein 1 | 60 | 108 | - | - | |
| Lele04g0644 | 644 | FunFam | EIN3-binding F-box protein 1 | 136 | 254 | - | - | |
| Lele04g0644 | 644 | ProSiteProfiles | F-box domain profile. | 63 | 113 | IPR001810 | GO:0005515 | |
| Lele04g0644 | 644 | FunFam | EIN3-binding F-box protein 1 | 505 | 642 | - | - | |
| Lele04g0644 | 644 | Pfam | Leucine Rich repeat | 559 | 580 | IPR001611 | GO:0005515 | |
| Lele04g0644 | 644 | Pfam | Leucine Rich repeat | 374 | 397 | IPR001611 | GO:0005515 | |
| Lele04g0644 | 644 | Pfam | Leucine Rich repeat | 349 | 370 | IPR001611 | GO:0005515 | |
| Lele04g0644 | 644 | Pfam | Leucine Rich repeat | 241 | 264 | IPR001611 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele04g0644 | Lele-ChrLele04 | 3880299 | 3882750 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele28g0623 | 28 | 3971757 | 3975195 | Lele04g0644 | 04 | 3880299 | 3882750 | CCT | |
| Lele25g0627 | 25 | 3954023 | 3956611 | Lele04g0644 | 04 | 3880299 | 3882750 | CCT | |
| Lele26g0638 | 26 | 4051357 | 4053895 | Lele04g0644 | 04 | 3880299 | 3882750 | CCT | |
| Lele04g0644 | 04 | 3880299 | 3882750 | Lele04g0644 | 04 | 3880299 | 3882750 | ECH | |
| Lele02g0625 | 02 | 3740650 | 3743114 | Lele04g0644 | 04 | 3880299 | 3882750 | hybridization |