Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0651 ATGAAGAATACCTCGTCTGAGGCTGCTCCATCTTTATCTTCTGCACCCTCTTCAACAGACCAATCACACGTTGCCACTCCATCATCGTCGCTGGCTTCGCCGGACAAACCGGTTTTAGTTTCGTCCGCCGCTGCTCCGGAGGACTTGGCTATAGGGTCAAGGGATGGTGGCGGCGCCCAGGAGTCCGTGACTGTGGAACGCCGAGGCGACTACTCGGCCGTTTGCCGATGGACGGTTCATAATTTTACACGAATAAAAGCTAGGGCGCTATGGAGCAAGTATTTTGAGGTCGGAGGTTATGATTGCCGCCTCTTGATATACCCCAAAGGTGACTCTCAAGCCTTGCCAGGCTATATCTCCATCTACCTCCAAATCATGGACCCTCGGGGCACTTCCTCGTCCAAATGGGACTGCTTTGCTAGCTACCGTTTGGCAATCGCGAACGTCGCCGACGATTCTAAGACCATTCATCGGGATTCGTGGCATCGGTTCTCAAGTAAGAAGAAATCACACGGGTGGTGTGATTTCACGCCTTCTACAACAGTACTGGATCCAAAATTGGGCTACTTGTTTAATGGTGATTCGGTATTGATAACCGCCAATATTCTTATTCTTAATGAGTCCATTAATTTTACTCGAGACAACAATGAGCTGCAATCATGGGCGTCTTCTTCTTCATCCATGATATCTTCCTCTGTTGTTGCCGGCCCTGTGTCCGACGTGTTGAGTGGAAAATTCACTTGGAAAGTGCATAATTTCAGTTTATTCAAGGAGATGATAAAAACACAGAAGATAATGAGCCCCGTTTTTCCAGCTGGGGAGTGTAATTTGAGGATTAGTGTCTATCAGAGCTCGGTTAATGGAGTCGAATATCTGTCAATGTGCTTGGAAAGCAAGGACACAGACAAGACTGTGATGTTGTCTGATAAGAGTTGCTGGTGTTTATTTCGAACGTCTGTCTTGAACCAGAGGCCAGGTTCGAATCACATGCATAGGGATTCGTATGGGCGGTTTGCAGCTGATAATAAAAGTGGTGATAATACGAGCTTGGGATGGAATGATTATATGAAGATGTCAGATTTTATTGGGACTGATTCGGGGTTTCTGGTGGATGACAATGCAGTTTTTAGTACGTCATTTCATGTGATTAAAGAGTTTAGTAGCTTCTTTAAGAATGGGGCTTTAATTGCAGGAAGAAGTGGGAATGGCGCAAGGAAATCAGATGGTCATATGGGTAAGTTTACTTGGAGGATTGAAAACTTCACAAGGTTAAAGGATTTATTGAAGAAGAGAAAAATTACGGGTCTTTGCATCAAGAGTCGGAGGTTTCAAATTGGTAATCGGGATTGTCGTCTCATTGTATATCCCCGAGGGCAGTCTCAGCCTCCATGCCACCTTTCAGTGTTTCTTGAAGTTACAGATTCAAGAAATACTTCCAGTGATTGGAGTTGTTTTGTTAGCCATCGGTTGTCAGTTGTGAACCAGAAGATGGAGGAGAAGTCTGTTAGCAAGGAATCTCAGAACCGCTACTCCAAGGCTGCAAAAGATTGGGGCTGGCGGGAATTTTTGACCCTCACTAGCCTCTTTGATCAAGATTCGGGTTTTCTTGTCCAGGATACTGTTGTATTCTCAGCAGAAGTTCTTATATTGAAAGAGACGTCAATAATGCAGGATTTGATTGATTACAATTCTGAGTTGAGTATTAGTAGTTCCCTTACTGATAGTTCTGTAAAGAGAAGGACATTTACATGGAAAGTGGAAAATTTCCTGTCATTTAAGGAAATAATGGAGACTCGAAAGATCTTCAGTAAATTTTTTCAGGCAGGTGGATGTGAACTTCGGATTGGTGTGTATGAGTCCTTTGACACCATATGTATTTATCTAGAGAGCGACCAGGCTGTTGGGAGTGATCCAGATAAAAACTTTTGGGTTAAATACAGGATGGCTGTTGTGAATCAAAAGACTCCAGCCAAGACAGTGTGGAAGGAATCCTCTATTTGTACAAAGACATGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCTGATATATTGGAAGCAGATGCAGGGTTTCTTGTCCGTGACACTGTTGTTTTTGTCTGTGAAATATTGGATTGCTGCCCTTGGTTTGATTTTTCAGACTTAGAGGTTTTAGCTTCAGATGATGATCAGGATGCTTTGACAACTGATCCTGATGAGCTTGTTGACTCTGAAGACAGTGAAGGAATGAGTGGAGACGAAGAAGACATTTTTAGGAATCTTCTTTCTCGAGCTGGATTTCACCTAACATATGGAGACAATCCTTCACGGCCACAAGTTACTTTAAGAGACAAGCTTTTAATGGATGCTGGTGCCATTGCTGGATTTCTGACTAGACTGCGAGTTTATCTCGGTGATGATCCTGTGAAAGTAAAGCGTATGCTTCTTCCCACCAAGCTCTCTAGTAGTTGTGATGGGAAGAAGGTTCCCAAGGCCGATGAATCTTCCCCCAGTTTGATGAACTTGCTGATGGGCGTTAAGAACTTGCAGCAGGCAATGATTGATTTACTTTTGGATATAATGGTGGAATGCTGCCAACCTTCCGAAGGGTCCTGTGCTGCTGATTCTCCTGAAGCTTGCTCAAAAACATCTCCTGATAGCAGTGGAGCTGCTAGTCCTATTGAATGTGATAGAGAAAATGGGGTAGCAGAATCTACTCAGTTTCCGGTTTATGAGAGGTTGGATTCTGCTGATGAAGAAAGTAGTAGTACATCTGCTGTACAAAGCTCTGACTCAACCAGTAGTATTATTCAGGAGAAAGCTCTTCCCGGACAACCTATTTTTCCACCTGAAACATTTGCTGTTGTTTCAGAAAATCCATCCTTTCGGTCAAAGACCAAGTGGCCAGAACAGTCTGAGGAGCTCTTAGGTTTGATTGTAAACTCACTAAGAACCCTTGATGGGGCTGTTCTGCAAGGCTGCCCTGAGCCACGACAGCGTCCTCAGTCTGCACGCAAAATTTCTATTGTGTTGGACAAAGCTCCCAAGCATCTGCAAGCTGACCTAGTAGCACTGGTTCCCAAATTGGTTGAGCCCTCTGAACATCCACTAGCTGCCTTTGCACTTCTTGAGCGACTTCAAAAGCCAGATGCAGAACCTGCCTTGCGAATGCCTGTTTTTGAGGCTCTTAGTCAACTGGAGTGTGGTAGTGAAGTGTGGGAACGTGTTCTATTCCAATCAATTGATCTTTTGGCTGACTCAAATGGCAAACCCCTGGCTGCAACTATCGATTTTATATTCAAAGCAGCATCTCAGTGTCAACATCTTCCTGAAGCAGTTAGATCTGTTCGTCTGAGACTCAAAAATCTAGGTCTTCAGGTTTCACCTTGTGTCCTTGACTTTTTGAGTAAGACTATTAATAGTTGGGGGGATGTTGCTGAAACTATGCTGAGGGACATTGATTGTGATGATGACTTGGGTGACAGTTGCTCAGCAGCGCTGTCATGTGGACTTTTCTTATTTGGTGAACATGGCGCAGCTCCTACTGGATTGAATGTGGTTGATGAACAGGCTTTCCGAGCTAGTTGTAATTTTTCTGATATTTACGTACTGATCGAGATGCTATCAATTCCTTGTCTTGCTGTTGAAGCTTCGCAAACCTTTGAGAGAACTGTAGCTCGAGGAGCAATTGGTGCTCAGTCTGTAGCCTTGATTTTGGAGAAGCGTGCCTCCCAAAGATTGATTAATAATTCCAGAAATGCAGCTGAAAGTTTTCCATGTTCAGATGTTGCAGAGGGAAATGCAAATGAACCCTTTGGAGTTCAAAGAGATGATTTTACTTCAGTTCTTGGTCTTGCTGAAACATTAGCACTGTCCAGCGACCCATGTGTGAAAGAATTTGCAAAGTTACTCTATATGATATTGTTTAGATGGTATGTTGATGAATCTTATCGAGGGACGATGCTCAAGAGGCTTGTTGACCGGGCCACCAGCACTACGGATAATGGACATGAAGAAGATTTAGATTTGGATATTTTAGTTACTTTGGCCTGCGAGGAGCAGGAAATGGCTAGATCTGTGCTGAGTATGATGCGTGAAGTTGCTGAACTTGCATATGTTGATCGGTCTGCTCTATGGCACCAGTTATGTGCTAGCGAGGATGAAATCATTCGTCTTCGTGAAGAAAAGAAAGCTGAGATTTCCAATATGGCTAAGGAAAAAGCTGTTGATACAAAAAAACTGAGTGAATCCGAGGCCACAAGTATTCGTCTCAAGTCTGAGATGAGGGCTGAGATGGATCGGTGGGCTCAGGAGAAGAAAGAGCTAGTTGAACAAATACAAGAAGTTGAAAGTCAGCTTGAGTGGCTTCGTTCAGAGCAGGATGATGAAATAGCAAGGCTCTCTGCAGAAAAGAAATCTCTTCAGGATCGTGTCCATGATGCTGAGGCACAACTCTCACAATTGAAGTCCCGGAAACGTGATGAATTAAAGACTTGTCATGCTTTCATCTTTCATGAACCTGCGTCTTTTGTAGGAAGTTGTGTTATGTTGAGTAATGTCCTGGCAAATAAAGTAGTCAAGGAAAAAAATGCACTTGCCGAAAGATTGAAGAGTGCTGAAGCTGCACGGAAGAGATTTGATGAAGAACTGAAAAGATATGCCACAGAGAATGTCACTAGGGAAGAAGTACGGAAATCGCTTGAGGATGAAGTTCGTAGATTGACGCAAACGGTTGGGCAAACTGAGGGAGAAAAGAGAGAGAAGGAAGAGCAGGTTGCTAGGTGTGAAGCATATATTGATGGCATGGAATCAAAATTGCAGGCCTGCCAGCAATATATTCACACACTGGAAGCTTCGCTTCAGGAGGAAATGTCACGTCATGCTCCTCTATACGGTGCTGGTCTGGAGGCTCTTTCAATGAAAGAGTTGGAAACACTGTCACGTATCCACGAGGAAGGGCTAAGGCAGATCCATGCCCTTCAACAGCATAAGGGGACTCCAGCTGGCAGTCCTCTTGTGAGTCCACATGCCCTTCCTCAGAATCACAATCATGGATTATATCCCTCTGCCTCCCCTCCATTGCCTGTGGGGTTCCCTCCATCACTCATTCCAAATGGGGTAGGCATCCACAGCAATGGCCACGTCAATGGCGTTGTGGGGCCCTGGTTTAAGCACACTTGA 5160 0.4422 MKNTSSEAAPSLSSAPSSTDQSHVATPSSSLASPDKPVLVSSAAAPEDLAIGSRDGGGAQESVTVERRGDYSAVCRWTVHNFTRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIANVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSTTVLDPKLGYLFNGDSVLITANILILNESINFTRDNNELQSWASSSSSMISSSVVAGPVSDVLSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTDKTVMLSDKSCWCLFRTSVLNQRPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFIGTDSGFLVDDNAVFSTSFHVIKEFSSFFKNGALIAGRSGNGARKSDGHMGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEEKSVSKESQNRYSKAAKDWGWREFLTLTSLFDQDSGFLVQDTVVFSAEVLILKETSIMQDLIDYNSELSISSSLTDSSVKRRTFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVKYRMAVVNQKTPAKTVWKESSICTKTWNNSVLQFMKVSDILEADAGFLVRDTVVFVCEILDCCPWFDFSDLEVLASDDDQDALTTDPDELVDSEDSEGMSGDEEDIFRNLLSRAGFHLTYGDNPSRPQVTLRDKLLMDAGAIAGFLTRLRVYLGDDPVKVKRMLLPTKLSSSCDGKKVPKADESSPSLMNLLMGVKNLQQAMIDLLLDIMVECCQPSEGSCAADSPEACSKTSPDSSGAASPIECDRENGVAESTQFPVYERLDSADEESSSTSAVQSSDSTSSIIQEKALPGQPIFPPETFAVVSENPSFRSKTKWPEQSEELLGLIVNSLRTLDGAVLQGCPEPRQRPQSARKISIVLDKAPKHLQADLVALVPKLVEPSEHPLAAFALLERLQKPDAEPALRMPVFEALSQLECGSEVWERVLFQSIDLLADSNGKPLAATIDFIFKAASQCQHLPEAVRSVRLRLKNLGLQVSPCVLDFLSKTINSWGDVAETMLRDIDCDDDLGDSCSAALSCGLFLFGEHGAAPTGLNVVDEQAFRASCNFSDIYVLIEMLSIPCLAVEASQTFERTVARGAIGAQSVALILEKRASQRLINNSRNAAESFPCSDVAEGNANEPFGVQRDDFTSVLGLAETLALSSDPCVKEFAKLLYMILFRWYVDESYRGTMLKRLVDRATSTTDNGHEEDLDLDILVTLACEEQEMARSVLSMMREVAELAYVDRSALWHQLCASEDEIIRLREEKKAEISNMAKEKAVDTKKLSESEATSIRLKSEMRAEMDRWAQEKKELVEQIQEVESQLEWLRSEQDDEIARLSAEKKSLQDRVHDAEAQLSQLKSRKRDELKTCHAFIFHEPASFVGSCVMLSNVLANKVVKEKNALAERLKSAEAARKRFDEELKRYATENVTREEVRKSLEDEVRRLTQTVGQTEGEKREKEEQVARCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSMKELETLSRIHEEGLRQIHALQQHKGTPAGSPLVSPHALPQNHNHGLYPSASPPLPVGFPPSLIPNGVGIHSNGHVNGVVGPWFKHT 1719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0651 1719 ProSiteProfiles MATH/TRAF domain profile. 579 703 IPR002083 GO:0005515
Lele01g0651 1719 MobiDBLite consensus disorder prediction 724 745 - -
Lele01g0651 1719 CDD MATH 244 376 IPR002083 GO:0005515
Lele01g0651 1719 CDD Prefoldin 1434 1581 - -
Lele01g0651 1719 Coils Coil 1515 1549 - -
Lele01g0651 1719 ProSiteProfiles MATH/TRAF domain profile. 243 380 IPR002083 GO:0005515
Lele01g0651 1719 Pfam MATH domain 443 549 IPR002083 GO:0005515
Lele01g0651 1719 Pfam MATH domain 80 204 IPR002083 GO:0005515
Lele01g0651 1719 Pfam MATH domain 592 699 IPR002083 GO:0005515
Lele01g0651 1719 MobiDBLite consensus disorder prediction 907 929 - -
Lele01g0651 1719 MobiDBLite consensus disorder prediction 913 929 - -
Lele01g0651 1719 ProSiteProfiles MATH/TRAF domain profile. 72 202 IPR002083 GO:0005515
Lele01g0651 1719 MobiDBLite consensus disorder prediction 863 892 - -
Lele01g0651 1719 CDD MATH 76 202 IPR002083 GO:0005515
Lele01g0651 1719 SMART math_3 416 528 IPR002083 GO:0005515
Lele01g0651 1719 SMART math_3 584 684 IPR002083 GO:0005515
Lele01g0651 1719 SMART math_3 248 361 IPR002083 GO:0005515
Lele01g0651 1719 SMART math_3 74 182 IPR002083 GO:0005515
Lele01g0651 1719 CDD MATH 581 703 IPR002083 GO:0005515
Lele01g0651 1719 Coils Coil 1557 1584 - -
Lele01g0651 1719 MobiDBLite consensus disorder prediction 1 37 - -
Lele01g0651 1719 SUPERFAMILY TRAF domain-like 412 553 - -
Lele01g0651 1719 SUPERFAMILY TRAF domain-like 580 704 - -
Lele01g0651 1719 ProSiteProfiles MATH/TRAF domain profile. 411 547 IPR002083 GO:0005515
Lele01g0651 1719 SUPERFAMILY TRAF domain-like 72 209 - -
Lele01g0651 1719 SUPERFAMILY TRAF domain-like 241 386 - -
Lele01g0651 1719 Coils Coil 1418 1491 - -
Lele01g0651 1719 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 569 705 IPR008974 GO:0005515
Lele01g0651 1719 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 239 386 IPR008974 GO:0005515
Lele01g0651 1719 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 58 208 IPR008974 GO:0005515
Lele01g0651 1719 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 401 556 IPR008974 GO:0005515
Lele01g0651 1719 CDD MATH 412 547 IPR002083 GO:0005515
Lele01g0651 1719 MobiDBLite consensus disorder prediction 1 36 - -
Lele01g0651 1719 PANTHER TRAF-LIKE FAMILY PROTEIN 1517 1719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0651 Lele-ChrLele01 3806642 3814591 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0651 01 3806642 3814591 Lele28g0623 28 3971757 3975195 CCT
Lele01g0651 01 3806642 3814591 Lele01g0651 01 3806642 3814591 ECH
Lele01g0651 01 3806642 3814591 Lele03g0650 03 3811014 3819821 hybridization
Lele01g0651 01 3806642 3814591 Lele04g0657 04 3953879 3962388 hybridization