Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0650 ATGTTGTCAAAGAGAAATGAAGCAACAGACGTCGCCATTGTTTTTGGGGGCATATCCATGAAGGACGGGGAGGATACTGGAGCAGGAGAGAGTGCCCGGCAGGAATTGTGGAAGGAGAAATGTATAATGAGTTCCCAGAAGGCAGAAGCAATGCAGTCGGGTCCTAAACCCCCATTACTCTCTCTACGCCCTGCATCCATCTCCCACAACGAACGCCTGCGACGTGCCCTGTTAACACATACCAGACAAAGGAACAAGCGAACCAACGCCAAAACAACAATGAAGCATACCTCGTCTGAGGCAGCTCCATCTTTATCTTCTGCACCCTCTTCAACAGACCAATCACACGTTGCCACTCCATCGTCGTCGCTGGCTTCGCCGGACAAACCTGTTTTAGTTTCGTCCGCCGCTGCTCCGGAGGACTTGGCTATAGGGTCAAGGGATGGTGGCGGCGCCCAGGAGTCCGTGACTGTCGAACGCCGGGGCGACTACTCGGCCGTTTGCCGATGGACGGTTCATAATTTTACACGAATAAAAGCTAGGGCGCTATGGAGCAAGTATTTTGAGGTCGGAGGTTATGATTGCCGCCTCTTGATATACCCCAAGGGTGACTCTCAAGCCTTGCCAGGCTATATCTCCATCTACCTCCAAATCATGGACCCTCGGGGCACTTCCTCGTCCAAATGGGACTGCTTTGCTAGCTACCGTTTGACAATCGCGAACGTCGCCGACGATTCTAAGACCATTCATCGGGATTCGTGGCATCGGTTCTCAAGTAAGAAGAAATCACACGGGTGGTGCGATTTCACGCCTTCTACAACAGTACTGGATCCAAAATTGGGCTACTTGTTTAATGGTGATTCGGTATTGATAACCGCCGATATTCTTATTCTTAATGAGTCCATTAATTTTACTCGAGACAACAATGAGCTGCAATCATGGGCGTCTTCTTCTTCATCCATGATATCTTCCTCTGTTGTTGCGGGCCCTGTGTCCGACGTGTTGAGTGGAAAATTCACTTGGAAAGTGCATAATTTCAGTTTATTCAAGGAGATGATAAAAACACAGAAGATAATGAGCCCTGTTTTTCCAGCTGGGGAGTGTAATTTGAGGATTAGTGTCTATCAGAGCTCGGTTAATGGGGTCGAATATCTGTCAATGTGCTTGGAAAGCAAGGACACAGACAAGACTGTGATGTTGTCTGATAAGAGTTGCTGGTGTTTATTTCGAACGTCTGTCTTGAACCAGAGGCCAGGTTCGAATCACATGCATAGGGATTCGTATGGGCGGTTTGCAGCTGATAATAAAAGTGGTGATAATACGAGCTTGGGATGGAATGATTATATGAAGATGTCAGATTTTATTGGGACTGATTCGGGGTTTCTGGTGGATGACACTGCAGTTTTTAGTACGTCATTTCATGTGATTAAAGAGTTTAGTAGCTTCTTTAAGAATGGGGCTTTAATTGCAGGAAGAAGTGGGAATGGCGCAAGGAAATCAGATGGTCATATGGGCAAGTTTACTTGGAGGATTGAAAACTTCACAAGGTTAAAGGATTTATTGAAGAAGAGAAAAATCACGGGTCTTTGCATCAAGAGTCGGAGGTTTCAAATTGGTAATCGGGATTGTCGTCTCATTGTATATCCCCGAGGGCAGTCTCAGCCTCCATGCCACCTTTCAGTGTTTCTTGAAGTTACAGATTCAAGAAATACTTCCAGTGATTGGAGTTGTTTTGTTAGTCATCGGTTGTCAGTTGTGAACCAGAAGATGGAGGAGAAGTCTGTTAGCAAGGAATCTCAGAACCGCTACTCCAAGGCTGCAAAAGATTGGGGCTGGCGTGAATTTGTGACCCTCACTAGCCTCTTTGATCAAGATTCGGGTTTTCTTGTCCAGGATACTGTTGTATTCTCAGCAGAAGTTCTTATATTGAAAGAGACGTCAATAATGCAGGATTTGATTGATTACAATTCTGAGTTGAGTAGTAGTTCCCTTACTGATAGTTATGTAAAGAAAAGGACATTTACATGGAAAGTGGAGAATTTCCTGTCGTTTAAGGAAATAATGGAGACTCGAAAGATCTTCAGTAAATTTTTTCAGGCGGGTGGATGTGAACTCCGGATTGGTGTGTATGAGTCCTTTGACACCATATGTATTTATCTAGAGAGCGACCAGGCTGTTGGGAGTGATCCAGATAAAAACTTTTGGGTTAAATACAGGATGGCTGTTGTGAATCAAAAGAATCCAGCCAAGACAGTGTGGAAGGAATCCTCTATTTGTACAAAGACATGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCTGATATATTGGAAGCAGATGCAGGGTTTCTTGTCCGTGACACTGTTGTTTTTGTCTGTGAAATATTGGATTGCTGCCCTTGGTTTGATTTTTCAGACTTAGAGGTTTTAGCTTCAGATGATGATCAGGATGCTTTGACAACTGATCCTGATGAGCTTGTTGACTCTGAAGACAGTGAAGGAATAAGTGGAGACGAAGAAGACATTTTTAGGAATCTTCTTTCTCGAGCTGGATTTCACCTAACATATGGGGACAATCCTTCACAGCCGCAAGTTACTTTAAGAGACAAGCTTTTAATGGATGCTGGTGCAATTGCTGGATTTCTGACTAGGCTGCGAGTTTATCTCGGTGATGATCCTGTGAAAGTAAAGCGTATGCTTCTTCCAACCAAGCTCTCTGGTAGTTGTGATGGGAAGAAGGTTGCTAAGGCCGATGAATCTTCCCCCAGTTTGATGAACTTGCTGATGGGGGTTAAGAACTTGCAGCAGGCAATGATTGATTTACTTTTGGATATAATGGTGGAATGCTGCCAACCTTCCGAAGGGTCCTTTGCTGCTGATTCTCCTGAAGCTTGCTCGAAAACATCTCCTGATAGCAGGGGAGCTGCTAGTCCTATTGAATGTGATAGAGAAAATGGGGTAGCAGAATCTACTCAGTTTCCTGTTTATGAGAGGTTGGATTCTGCTGATGAAGAAAGTAGTAGTACATCTGCTGTACAAAGCTCTGACTCAAACGGTAGTGTTATTCAGGAGAAAGCTCTTCCTGGACAACCTATTTTTCCACCTGAAACATCTGCTGTTGTTTCAGAAAATCTATCCTTTCGGTCAAAGACCAAGTGGCCAGAACAGTCTGAGGAGCTCTTAGGTTTGATTGTAAACTCACTAAGAACCCTTGATGGGGCTGTTTCGCAAGGCTTCCCTGAGCCACGACAGCGTCCTCAGTCTGCACGCAAAATTTCTATTGTGTTGGACAAAGCTCCCAAGCATCTGCAAGCTGACCTAGTAGCACTGGTTCCCAAATTGGTTGAGCGCTCTGAACATCCACTAGCTGCCTTTGCACTTCTTGAGCGACTTCAAAAGCCAGATGCAGAACCTGCCTTGCGAATGCCTGTTTTTGAGGCTCTTAGTCAACTGGAGTGTGGTAGTGAAGTGTGGGAACGTGTTCTATTCCAATCAATTGAGCTTTTGGCCGACTCAAATGGCAAACCCCTGGCTGCAACTATAGATTTTATATTCAAAGCAGCATCTCAGTGTCAACATCTTCCTGAAGCAGTTAGATCTGTTCGTCTCAGACTCAAAAATCTAGGTCTTCAGGTTTCACCTTGTGTCCTTGCCTTTTTGAGTAAGACTATTAATAGTTGGGGGGATGTTGCTGAAACTATGCTGAGGGACATTGATTGTGATGATGACTTTGGTGACAGTTGCTCAGCAGCGCTGTCATGTGGACTTTTCTTATTTGGTGAACATGGCGTAGCTCCTACTGGATTGAATGTGGTTGATGAACAGGCTTTCCGAGCTAGTTGTAATTTTTCTGATATTTACGTACTGATCGAGATGCTATCAATTCCTTGTCTTGCTGTTGAAGCTTCGCAAACCTTTGAGAGAACTGTAGCTCGAGGGGCAATTGGTGCTCAGTCTGTAGCCTTGGTTTTGGAGAACCGTGCCTCCCAAAGATTGACTAATAATTCCAGAAATGCAGCTGAAAGTTTTCCATGTTCAGATGTTGTTGCAGAGGGAAATGCCAATGAACCCCTTGGAGTTCAAAGAGATGATTTTACTTCAGTTCTTGGTCTTGCTGAAACATTAGCACTGTCCAGCGACCCATGTGTGAAAGAATTTGTAAAGTTACTCTATATGATATTGTTTAGATGGTATGTCGATGAATCTTATCGAGGGACAATGCTCAAGAGGCTTGTTGACCGGGCCACCAGCACTACAGATAATGGACATGAAGAAGATTTAGATTTGGATATTTTAGTTGCTTTGGCCTGCGAGGAGCAGGAAATGGCTAGATCTGTGTTGAATATGATGCGTGAAGTTGCTGAACTTGCATATGTTGATCGGTCTGCTCTATGGCACCAGTTATGTGCTAGCGAAGACGAAATCATTCGTCTTCGTGAAGAAAAGAAAGCCGAGATTTCCAATATGGCTAAGGAAAAAGCTGTTGATACAAAAAAACTGAGTGAATCCGAGGCCACAAGTATTCGTCTCAAGTCTGAGATGAGGGCTGAGATGGATCGGTGGGCTCGGGAGAAGAAGGAGCTAGTTGAACAAATACAAGAAGTTGAAAGTCAGCTTGAGTGGCTTCGTTCAGAGCGGGATGATGAAATAGCAAGGCTCTCTGCAGAAAAGAAATCTCTTCAGGATCGTGTCCATGATGCTGAGGCACAACTCTCACAATTGAAGTCCCGGAAACGCGATGAATTAAAGACTTGTCATGCTTTCATCTTTCATGAACCCGCACCTTTTGTAGGAAGTTGTGCTATGATGAGTAATGTCCTGGCAAATAAAGTAGTCAAGGAAAAAAATGCACTTGCCGAAAGATTGAAGAGTGCTGAAGCTGCACGGAAGAGATGTGATGAAGAAGTGAAAAGATATGCCACAGAAAATGTCTCTAGGGAAGAAGTACGGAAATCTCTTGAGGATGAAGTTCGTAGATTGACACAAACGGTTGGGCAAACTGAGGGAGAAAAGAGAGAGAAGGAAGAGCAGGTTGCTAGGTGTGAAGCATATATTGATGGCATGGAATCAAAATTGCAGGCCTGCCAGCAATATATTCACACACTGGAAGCTTCGCTTCAGGAGGAAATGTCACGTCATGCTCCTCTATACGGTGCTGGTCTGGAGGCTCTTTCAATGAAAGAGTTGGAAACACTGTCACGTATCCACGAGGAAGGGCTAAGGCAGATCCATGCCCTTCAACAGCGTAAGGGGACTCCAGCTGGCAGTCCTCTTGTGAGTCCACACGCCCTTCCTCACAATCACCATCATGGATTATATCCCTCTGCCTCCCCCCCATTGCCTGTGGGGCTCCCTCCATCACTCATTCCAAATGGGGTAGGCATCCACAGCAATGGCCACGTCAATGGCGCTGTGGGGCCCTGGTTTAAGCACACTTGA 5439 0.449 MLSKRNEATDVAIVFGGISMKDGEDTGAGESARQELWKEKCIMSSQKAEAMQSGPKPPLLSLRPASISHNERLRRALLTHTRQRNKRTNAKTTMKHTSSEAAPSLSSAPSSTDQSHVATPSSSLASPDKPVLVSSAAAPEDLAIGSRDGGGAQESVTVERRGDYSAVCRWTVHNFTRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLTIANVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSTTVLDPKLGYLFNGDSVLITADILILNESINFTRDNNELQSWASSSSSMISSSVVAGPVSDVLSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTDKTVMLSDKSCWCLFRTSVLNQRPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFIGTDSGFLVDDTAVFSTSFHVIKEFSSFFKNGALIAGRSGNGARKSDGHMGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEEKSVSKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILKETSIMQDLIDYNSELSSSSLTDSYVKKRTFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVKYRMAVVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDILEADAGFLVRDTVVFVCEILDCCPWFDFSDLEVLASDDDQDALTTDPDELVDSEDSEGISGDEEDIFRNLLSRAGFHLTYGDNPSQPQVTLRDKLLMDAGAIAGFLTRLRVYLGDDPVKVKRMLLPTKLSGSCDGKKVAKADESSPSLMNLLMGVKNLQQAMIDLLLDIMVECCQPSEGSFAADSPEACSKTSPDSRGAASPIECDRENGVAESTQFPVYERLDSADEESSSTSAVQSSDSNGSVIQEKALPGQPIFPPETSAVVSENLSFRSKTKWPEQSEELLGLIVNSLRTLDGAVSQGFPEPRQRPQSARKISIVLDKAPKHLQADLVALVPKLVERSEHPLAAFALLERLQKPDAEPALRMPVFEALSQLECGSEVWERVLFQSIELLADSNGKPLAATIDFIFKAASQCQHLPEAVRSVRLRLKNLGLQVSPCVLAFLSKTINSWGDVAETMLRDIDCDDDFGDSCSAALSCGLFLFGEHGVAPTGLNVVDEQAFRASCNFSDIYVLIEMLSIPCLAVEASQTFERTVARGAIGAQSVALVLENRASQRLTNNSRNAAESFPCSDVVAEGNANEPLGVQRDDFTSVLGLAETLALSSDPCVKEFVKLLYMILFRWYVDESYRGTMLKRLVDRATSTTDNGHEEDLDLDILVALACEEQEMARSVLNMMREVAELAYVDRSALWHQLCASEDEIIRLREEKKAEISNMAKEKAVDTKKLSESEATSIRLKSEMRAEMDRWAREKKELVEQIQEVESQLEWLRSERDDEIARLSAEKKSLQDRVHDAEAQLSQLKSRKRDELKTCHAFIFHEPAPFVGSCAMMSNVLANKVVKEKNALAERLKSAEAARKRCDEEVKRYATENVSREEVRKSLEDEVRRLTQTVGQTEGEKREKEEQVARCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSMKELETLSRIHEEGLRQIHALQQRKGTPAGSPLVSPHALPHNHHHGLYPSASPPLPVGLPPSLIPNGVGIHSNGHVNGAVGPWFKHT 1812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0650 1812 SUPERFAMILY TRAF domain-like 334 479 - -
Lele03g0650 1812 CDD MATH 673 795 IPR002083 GO:0005515
Lele03g0650 1812 SUPERFAMILY TRAF domain-like 165 302 - -
Lele03g0650 1812 SUPERFAMILY TRAF domain-like 672 796 - -
Lele03g0650 1812 Coils Coil 1608 1642 - -
Lele03g0650 1812 ProSiteProfiles MATH/TRAF domain profile. 504 640 IPR002083 GO:0005515
Lele03g0650 1812 PANTHER TRAF-LIKE FAMILY PROTEIN 1610 1812 - -
Lele03g0650 1812 CDD MATH 337 469 IPR002083 GO:0005515
Lele03g0650 1812 SMART math_3 167 275 IPR002083 GO:0005515
Lele03g0650 1812 SMART math_3 341 454 IPR002083 GO:0005515
Lele03g0650 1812 SMART math_3 676 776 IPR002083 GO:0005515
Lele03g0650 1812 SMART math_3 509 621 IPR002083 GO:0005515
Lele03g0650 1812 MobiDBLite consensus disorder prediction 44 130 - -
Lele03g0650 1812 MobiDBLite consensus disorder prediction 1748 1776 - -
Lele03g0650 1812 ProSiteProfiles MATH/TRAF domain profile. 336 473 IPR002083 GO:0005515
Lele03g0650 1812 MobiDBLite consensus disorder prediction 92 129 - -
Lele03g0650 1812 Coils Coil 1650 1677 - -
Lele03g0650 1812 CDD MATH 169 295 IPR002083 GO:0005515
Lele03g0650 1812 CDD MATH 505 640 IPR002083 GO:0005515
Lele03g0650 1812 SUPERFAMILY TRAF domain-like 505 646 - -
Lele03g0650 1812 ProSiteProfiles MATH/TRAF domain profile. 165 295 IPR002083 GO:0005515
Lele03g0650 1812 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 658 797 IPR008974 GO:0005515
Lele03g0650 1812 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 494 649 IPR008974 GO:0005515
Lele03g0650 1812 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 151 301 IPR008974 GO:0005515
Lele03g0650 1812 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 332 479 IPR008974 GO:0005515
Lele03g0650 1812 Pfam MATH domain 684 791 IPR002083 GO:0005515
Lele03g0650 1812 Pfam MATH domain 536 642 IPR002083 GO:0005515
Lele03g0650 1812 Pfam MATH domain 173 296 IPR002083 GO:0005515
Lele03g0650 1812 MobiDBLite consensus disorder prediction 999 1020 - -
Lele03g0650 1812 ProSiteProfiles MATH/TRAF domain profile. 671 795 IPR002083 GO:0005515
Lele03g0650 1812 MobiDBLite consensus disorder prediction 1005 1020 - -
Lele03g0650 1812 MobiDBLite consensus disorder prediction 955 984 - -
Lele03g0650 1812 Coils Coil 1511 1584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0650 Lele-ChrLele03 3811014 3819821 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0650 03 3811014 3819821 Lele28g0623 28 3971757 3975195 CCT
Lele03g0650 03 3811014 3819821 Lele03g0650 03 3811014 3819821 ECH
Lele01g0651 01 3806642 3814591 Lele03g0650 03 3811014 3819821 hybridization
Lele02g0639 02 3822301 3828569 Lele03g0650 03 3811014 3819821 hybridization