Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0639 ATGTTGAGGTTGTCATTAGTAAAGGATCCTGCTAATTTTCTTCACCTGCTTTTTATACTATCAGGGCAGTCACAGCCTCCATGCCACCTTTCAGTGTTTCTTGAAGTTACAGATTCAAGAAATACTTCCAGTGATTGGAGTTGTTTTGTTAGTCATCGGTTGTCAGTTGTTAACCAGAAGATGGAGGAGAAGTCTGTTAGCAAGGAATCTCAGAACCGCTACTCCAAGGCTGCAAAAGACTGGGGCTGGCGTGAGTTTGTGACCCTCACAAGCCTCTTTGATCAAGATTCGGGTTTTCTTGTCCAGGATGCTGTTGTATTCTCAGCAGAAGTTCTTGTATTGAAAGAGACATCAATAATGCAGGATTTGATTGGTTACAATTCTGAGTTGAGTAGTAGTAGTTCCCTTACTGATGGTTATGTAAAGAGAAGGACATTTACATGGAAAGTGGAGAATTTCCTGTCATTTAAGGAAATAATGGAGACTCGAAAGATCTTCAGTAAATTTTTTCAGGCGGGTGGATGTGAACTCCGGATTGGTGTGTATGAGTCCTTTGACACCATATGTATTTATCTAGAGAGCGACCAGGCTGTTGGGAGTGATCCAGATAAAAACTTTTGGGTTAAATACAGGATGGCTGTTGTGAATCAAAAGAACCCAGCTAAGACAGTGTGGAAGGAATCCTCTATTTGTACGAAGACATGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCTGATATATTGGAAGCCGATGCAGGGTTTCTTGTCCGTGACACTGTTGTTTTTGTCTGTGAAATATTGGATTGCTGCCCTTGGTTTGATTTTTCGGACTTAGAGGTTTTAGCTTCAGATGATGATCAGGATGCTTTGACAACTGATCCTGATGAACTTGTTGACTCTGAAGACAGTGAAGGAATAAATGGAGACGAAGAAGACATTTTTAGAAATCTCCTTTCTCGAGCTGGATTTCACCTAACATATGGAGACAATCCTTCACAGCCACAAGTTACTTTTAGAGAAAAGCTTTTAATGGACGCTGGTGCAATTGCTGGACTAATGACTGGATTGCGACTTTATCTCGATGATCCTGTGAAAGTAAAGCGTCTGCTTCTTCCAACCAAGCTCTCTGGTAGTTGTGATGGGAAGAAGGTTGCTAAGGCCGATGAATCTTCCCCGAGTTTGATGAACTTGCTGATGGGGGTTCAGGTCTTGCAGCAGGCAATGATTGATTTACTTTTGGATATAATGGTGGAATGCTGCCAACCTTCCGAAGGATCCTGTGCTGCTGATTCTCCTGAAGCATGCTTAAAAGCATCTCCTGATAGCAGTGGAGCTGCTAGTCCTCTTGAATGTGATAGAGAAAATGGGGCAGCAGAATCTGCTCAATTTCCTGTCTATGAGAGGTTGGATTCTGTGGATGAAGAAAGTAGTAGTACATCTGCTGTACAAAGCTCTGATTCAAACGTTAGTGTTATTCAGGAGAAAGCTCTTCCTGGACAACCTATTTTTCCACCTGAAACATCTGCTGTTGTTTCAGAAAATCCATCCTTTCGATCAAAGACCAAGTGGCCAGAACAGTCCGATGAGCTCTTAGGTTTGGTTGTAAACTCACTAAGAACCCTTGATGGGGTTGTTCTGCAAGGCTGCCCTGAGCCACGACGGTGTCCTCAGTCTGCACTCAAAATTTCTATTGTGTTGGACAAAGCTCCAAAGCATCTGCATGCTGACCTAGTAGCACTTGTTCCCAAATTGGTTGAGCCCTCAGAACATCCACTAGCTGCCTGTGCACTTCTTGAGCGACTTCAAAAGCCAGATGCAGAACCTGTCTTGCGAATGCCTGTTTTTGATGCTCTTAGTCAACTGGAGTGTGGTAGTGAAGTCTGGGAACGTGTTTTATTTCAATCAATTGAGCTTTTGGCTGACTCAAATGGCGAACCCCTTGCTGCAACTATAGATTTTATATTCAAAGCAGCATCTCAGTGTCAACATCTTCATGAAGCAGTTAGATCTGTTCGTCTCAGACTAAAAAATCTAGGTCTTCAGGTTTCACCTTGTGTCCTTGACTTTTTGAGTGAGACTATTAATAGTTGGGGGGATGTTGCTGAAACTATACTGAGGGACATTGATTATGATGATGACTTGGGTGACAGTTGCTCAGCGCTGTCATGTGAACTTTTCTTATTTGGTGAACATGGCGCAGCTCCTACTGGATTGAATGTGGTTGATGAACAGGCTTTCCAAGCTAGTTGTAATTTTTCTGATATTTACATACTGATTGAGATGCTATCAATTCCTTGTCTTGCTGTTGAAGCTTCTCAAACCTTTGAGAGAGCTGTAGCTCGAGGGGCAATTGGTGCTCAGTCTGTAGCCTTGGTTTTGGAGAAGCGTGCCTCCCAAAGATTGACTAATAATTCCAGAAATGCAGCTGAAAGTTTTCCATGTTCAGATGTTGTTGCAGAGGGAAATGCCAATGAACCCTTTGGAGTTCAAAGAGATGATTTTACTTCAGTTCTTGGTCTTGCTGAAACATTAGCTCTGTCCAGAGACCCATGTGTGAAAGAATTTGTAAAGTTACTCTATATGATATTGTTTAGATGGTATGTTGATGAATCTTATCGAGGGACAATGCTCAAAAGGCTTGTTGACCGAGCCACCAGCACTACAGATAATGGACATGAAGAAGATTTAGATTTGGATATTTTAGTTACTTTGGCCTGTGAGGAGCAGGAAATGGCTAGATCTGTTTTGAGTATGATGCGTGAAGTTGCTGAACTTGCAAATGTTGATCGGTCTGCTCTATGGCACCAGTTATGTGCTAGTGAAGACGAAATCATTCGTCTTCGTGAAGAAAAGAAAGCTGAGATTTCCAATATGGCTAAGGAAAAAGCTGCTGTTACACAAAAGCTGAGTGAATCCGAGGCCACAAGTATTCATCTCAAGTCTGAGATGAAGGCTGAGATGGATCGGTGGGCTCGGGAGAAGAAGGAGCTAGTTGAACAAATACAAGAGGTGGAAAGTCAGCTTGAGTGGCTTCGTTCAGAGCGAGATGATGAAAAAGCAAAGCTCTCTGCAGAGAAGAAATCTCTTCAGGACCGTGTGCATGATGCTGAGGCACAACTCTCACAATTTAAGTCGCGGAAACGTGATGAATTAAAGAAAGTAGTCAAGGAAAAAAATGCACTTGCCGAAAGATTGAAGAGTGCTGAAGCTGCACGGAAGAGATTTGATGAAGAACTGAAAAGATATGCAACAGAAAATGTCACTCGGGAAGAAGTACGAAAGTCACTTGAGGATGAAGTTCGTAGATTGACACAAACGGTCGGGCAAACTGAGGGAGAAAAGAGAGAAAAGGAAGAGCAGGTTGTTAGGTGTGAAGCATATATTGATGGCATGGAATCAAAATTGCAGGCCTGCCAGCAATATATTCACACACTGGAAGCTTCGCTTCAGGAGGAAATGTCACGTCATGCTCCTCTATACGGTGCTGGTCTGGAGGCTCTTTCCATGAAAGAGTTGGAAACACTGTCACGTATCCACGAGGAAGGACTAAGGCAGATCCATGCCGTTCAACAGCGTAAAGGGAGTCCAGCTGGCAGTCCTCTTGTGAGTCCACATGCCCTTCCGCACAATCATGGATTATATCCCTCTGCCTCCCCTCCATTGCCTGTGGGGCTCCCTCCATCACTCATTCCAAATGGGGTAGGCCTCCACAGCAATGGCCACGTCAACGGCGCTGTGGGGCCCTGGTTTAAGCACACTTGA 3765 0.4348 MLRLSLVKDPANFLHLLFILSGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEEKSVSKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDAVVFSAEVLVLKETSIMQDLIGYNSELSSSSSLTDGYVKRRTFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVKYRMAVVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDILEADAGFLVRDTVVFVCEILDCCPWFDFSDLEVLASDDDQDALTTDPDELVDSEDSEGINGDEEDIFRNLLSRAGFHLTYGDNPSQPQVTFREKLLMDAGAIAGLMTGLRLYLDDPVKVKRLLLPTKLSGSCDGKKVAKADESSPSLMNLLMGVQVLQQAMIDLLLDIMVECCQPSEGSCAADSPEACLKASPDSSGAASPLECDRENGAAESAQFPVYERLDSVDEESSSTSAVQSSDSNVSVIQEKALPGQPIFPPETSAVVSENPSFRSKTKWPEQSDELLGLVVNSLRTLDGVVLQGCPEPRRCPQSALKISIVLDKAPKHLHADLVALVPKLVEPSEHPLAACALLERLQKPDAEPVLRMPVFDALSQLECGSEVWERVLFQSIELLADSNGEPLAATIDFIFKAASQCQHLHEAVRSVRLRLKNLGLQVSPCVLDFLSETINSWGDVAETILRDIDYDDDLGDSCSALSCELFLFGEHGAAPTGLNVVDEQAFQASCNFSDIYILIEMLSIPCLAVEASQTFERAVARGAIGAQSVALVLEKRASQRLTNNSRNAAESFPCSDVVAEGNANEPFGVQRDDFTSVLGLAETLALSRDPCVKEFVKLLYMILFRWYVDESYRGTMLKRLVDRATSTTDNGHEEDLDLDILVTLACEEQEMARSVLSMMREVAELANVDRSALWHQLCASEDEIIRLREEKKAEISNMAKEKAAVTQKLSESEATSIHLKSEMKAEMDRWAREKKELVEQIQEVESQLEWLRSERDDEKAKLSAEKKSLQDRVHDAEAQLSQFKSRKRDELKKVVKEKNALAERLKSAEAARKRFDEELKRYATENVTREEVRKSLEDEVRRLTQTVGQTEGEKREKEEQVVRCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSMKELETLSRIHEEGLRQIHAVQQRKGSPAGSPLVSPHALPHNHGLYPSASPPLPVGLPPSLIPNGVGLHSNGHVNGAVGPWFKHT 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0639 1254 Pfam MATH domain 28 112 IPR002083 GO:0005515
Lele02g0639 1254 Pfam MATH domain 156 263 IPR002083 GO:0005515
Lele02g0639 1254 ProSiteProfiles MATH/TRAF domain profile. 1 111 IPR002083 GO:0005515
Lele02g0639 1254 Coils Coil 981 1086 - -
Lele02g0639 1254 MobiDBLite consensus disorder prediction 431 453 - -
Lele02g0639 1254 CDD MATH 15 111 IPR002083 GO:0005515
Lele02g0639 1254 SUPERFAMILY TRAF domain-like 21 117 - -
Lele02g0639 1254 PANTHER TRAF-LIKE FAMILY PROTEIN 16 1254 - -
Lele02g0639 1254 Coils Coil 949 969 - -
Lele02g0639 1254 Coils Coil 1094 1121 - -
Lele02g0639 1254 MobiDBLite consensus disorder prediction 1193 1215 - -
Lele02g0639 1254 CDD MATH 145 267 IPR002083 GO:0005515
Lele02g0639 1254 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 14 139 IPR008974 GO:0005515
Lele02g0639 1254 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 140 273 IPR008974 GO:0005515
Lele02g0639 1254 SUPERFAMILY TRAF domain-like 144 268 - -
Lele02g0639 1254 ProSiteProfiles MATH/TRAF domain profile. 143 267 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0639 Lele-ChrLele02 3822301 3828569 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0639 02 3822301 3828569 Lele28g0623 28 3971757 3975195 CCT
Lele02g0639 02 3822301 3828569 Lele02g0639 02 3822301 3828569 ECH
Lele02g0639 02 3822301 3828569 Lele03g0650 03 3811014 3819821 hybridization
Lele02g0639 02 3822301 3828569 Lele04g0657 04 3953879 3962388 hybridization