Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0818 ATGGGTAACGCCGTTGGACGGAGTAGAAAAGCTAAGGTGATGAAAGTAGACGGAGAGACGTTCAAGTTGAAGACGCCGGCGAGGGTGGACGACGTCGTTAAGGACCATCCGGGTCATGTGTTGTTGGATTCGGAGGCGGTTAAGTATTTCGGAGTTCGGGCCAAACCGTTGGAGCCTTACCAGGAGTTGAAGCCTAAGAGAATCTACTTCCTCGTGGAGCTTCCCAAGGCTCAGCCGCCTCCGGCGGAGCCTCAGCTTCACAGGAGGGTCCGATCCAGTGGGATTCGGGGCATGAATGCTAAGGATAGGCTCGACTTCTTGATGCTTTCTAAGAGATCGGTCTCCGATATCACGTTCGCAAACAACAAGCAGCCGCCGTCCGCCGGCGGATGGGCTGGTCTCGAGCCCGCGACCGTCGACGGCGAGCCCTTGAGAGTCAAAATGAGGCTTCCCAAGGCCCAGCTGGAGAAGCTCATGGAGGAGAGCCACGACGGAGCTCAGGTTGCCGAAAAGATCATCAAATTGTATATGGCCAATAATGCCGCCGAGGCTGGTGGCGTCGCCGCCGGCGAAGCCAAGGCTGAGCTCGGTGCCATAAAAGAGGCTCAAAAGCCACGAGGGAAACGAGTGAGTTTCAGTCCAATGAAAGAAGAAGGAGAAATACGCGTAGCAGCAGCTTATCAATAG 687 0.556 MGNAVGRSRKAKVMKVDGETFKLKTPARVDDVVKDHPGHVLLDSEAVKYFGVRAKPLEPYQELKPKRIYFLVELPKAQPPPAEPQLHRRVRSSGIRGMNAKDRLDFLMLSKRSVSDITFANNKQPPSAGGWAGLEPATVDGEPLRVKMRLPKAQLEKLMEESHDGAQVAEKIIKLYMANNAAEAGGVAAGEAKAELGAIKEAQKPRGKRVSFSPMKEEGEIRVAAAYQ 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0818 228 Pfam PADRE domain 1 201 IPR025322 -
Lele27g0818 228 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0818 Lele-ChrLele27 16226922 16228502 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1265 25 8514876 8516451 Lele27g0818 27 16226922 16228502 CCT
Lele27g0818 27 16226922 16228502 Lele25g1273 25 8585625 8586050 CCT
Lele27g0818 27 16226922 16228502 Lele27g0811 27 16165524 16165949 CCT
Lele27g0818 27 16226922 16228502 Lele28g1277 28 8534908 8535333 CCT
Lele27g0818 27 16226922 16228502 Lele27g0818 27 16226922 16228502 ECH
Lele27g0818 27 16226922 16228502 Lele28g1270 28 8478871 8480400 ECH
Lele49g1213 49 8111548 8113253 Lele27g0818 27 16226922 16228502 ECH
Lele51g1232 51 8137345 8137953 Lele27g0818 27 16226922 16228502 ECH
Lele52g1579 52 19666558 19668171 Lele27g0818 27 16226922 16228502 ECH
Lele25g1265 25 8514876 8516451 Lele27g0818 27 16226922 16228502 hybridization
Lele26g1278 26 8432210 8433907 Lele27g0818 27 16226922 16228502 hybridization