Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele52g1579 ATGGGAAATACCTTAGGAGGCAAAAAAACCACTAAGGTAATGAAAATCGATGGGGAAACCTTCAAGCTCAAGACTCCATTGAAGGCTGGCGATGTTCTCAAGGACCATCCTGGTTTGGTTCTGCTAGATTCTGAAGCAGTGAAACATTATGGTATGAGAGCCAAACCTCTTCAACCCCACAAAGATTTGTTGCCTAAGAGACTGTATTTTCTGGTGGAGCTTCCGAAGGAGACAGTGACGGTTCCAAGAAGGGTTCGTTCTGAGATCAACATGAGCGCGAAAGATCGGCTCGAGAGCCTCATGCTCGCTAGAAGATCTGCCTCTGATCTGTCCATTATCAAACAAAGTAATAAGATGAATGTGAATGATGTTGTTGCAGATCAGGAGAAGGACGTTAATGGCAGTGGTGGCGGCGTGAGGTTGAAGATGAAGCTTCCTAGGGCTCAGGTTGAGAAGCTTGTGAGAGAAGCCAAAGATGAAGATGAAGCCGCACACAAGATTATGAGTCTTTGCATGCAGAAAGAAGCAGAGAGTAATACAAAGACACGTGATGAGAGGAGAGTGAGTTTCATGCCTATCAGCAAAGAAATTAGTGAAATAGCTGTGGCTTTTTAA 615 0.4455 MGNTLGGKKTTKVMKIDGETFKLKTPLKAGDVLKDHPGLVLLDSEAVKHYGMRAKPLQPHKDLLPKRLYFLVELPKETVTVPRRVRSEINMSAKDRLESLMLARRSASDLSIIKQSNKMNVNDVVADQEKDVNGSGGGVRLKMKLPRAQVEKLVREAKDEDEAAHKIMSLCMQKEAESNTKTRDERRVSFMPISKEISEIAVAF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele52g1579 204 Pfam PADRE domain 1 179 IPR025322 -
Lele52g1579 204 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele52g1579 Lele-ChrLele52 19666558 19668171 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1579 52 19666558 19668171 Lele52g1579 52 19666558 19668171 ECH
Lele52g1579 52 19666558 19668171 Lele25g1265 25 8514876 8516451 ECH
Lele52g1579 52 19666558 19668171 Lele26g1278 26 8432210 8433907 ECH
Lele52g1579 52 19666558 19668171 Lele27g0818 27 16226922 16228502 ECH
Lele52g1579 52 19666558 19668171 Lele28g1270 28 8478871 8480400 ECH
Lele49g1213 49 8111548 8113253 Lele52g1579 52 19666558 19668171 hybridization