Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1265 ATGGGTAACGCCGTTGGACGGAGTAGAAAAGCTAAGGTGATGAAAGTAGACGGAGAGACGTTCAAGTTGAAGACGCCGGCGAGGGTGGACGACGTCGTTAAAGACCATCCGGGTCATGTGTTGTTGGATTCGGAGGCGGTTAAGTATTTCGGAGTTCGGGCCAAACCGTTGGAGCCTTACCAGGAGTTGAAGCCTAAGAGAATCTACTTCCTCGTGGAGCTTCCCAAGGCTCAGCCGCCCCCGGCGGAGCCTCAGCTTCACAGGAGGGTCCGATCCAGTGGGATTCGGGGCATGAATGCTAAGGATAGGCTCGACTTCTTGATGCTTTCTAAGAGATCGGTCTCCGATATCACGTTCGCAAACAACAAGCAGCCACCGTCCACAGGCCGATGGGCTGGTCTCGAGCCCCCGCCCGTCGACGGCGAGCCCTTGAGAGTCAAAATGAGGCTTCCCAGGGCCCAGCTGGAGAAGCTCATGGAGGAGAGCCACGACGGAGCTCAGGTTGCCGAAAAGATCATCAAATTGTATATGGCCAATAATGCAGACGAGGCTGGTGGCGTCACCGCCGGCGAAGCCAAGGCTGAGCTCGGTGCCATAAAAGAGGCTCAAAAGCCACGAGGGAAACGAGTGAGTTTCAGTCCAATGGAAGAAGAAGGAGAAATACGCGTAGAAGCAGCTTATCAATAG 687 0.5502 MGNAVGRSRKAKVMKVDGETFKLKTPARVDDVVKDHPGHVLLDSEAVKYFGVRAKPLEPYQELKPKRIYFLVELPKAQPPPAEPQLHRRVRSSGIRGMNAKDRLDFLMLSKRSVSDITFANNKQPPSTGRWAGLEPPPVDGEPLRVKMRLPRAQLEKLMEESHDGAQVAEKIIKLYMANNADEAGGVTAGEAKAELGAIKEAQKPRGKRVSFSPMEEEGEIRVEAAYQ 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1265 228 MobiDBLite consensus disorder prediction 119 143 - -
Lele25g1265 228 MobiDBLite consensus disorder prediction 202 228 - -
Lele25g1265 228 Pfam PADRE domain 1 200 IPR025322 -
Lele25g1265 228 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1265 Lele-ChrLele25 8514876 8516451 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1265 25 8514876 8516451 Lele25g1265 25 8514876 8516451 CCT
Lele25g1265 25 8514876 8516451 Lele26g1278 26 8432210 8433907 CCT
Lele25g1265 25 8514876 8516451 Lele27g0818 27 16226922 16228502 CCT
Lele25g1265 25 8514876 8516451 Lele28g1270 28 8478871 8480400 CCT
Lele25g1265 25 8514876 8516451 Lele25g1265 25 8514876 8516451 ECH
Lele25g1265 25 8514876 8516451 Lele26g1278 26 8432210 8433907 ECH
Lele49g1213 49 8111548 8113253 Lele25g1265 25 8514876 8516451 ECH
Lele51g1232 51 8137345 8137953 Lele25g1265 25 8514876 8516451 ECH
Lele52g1579 52 19666558 19668171 Lele25g1265 25 8514876 8516451 ECH
Lele25g1265 25 8514876 8516451 Lele27g0818 27 16226922 16228502 hybridization
Lele25g1265 25 8514876 8516451 Lele28g1270 28 8478871 8480400 hybridization